Information for 9-ATGCCACCTTAAG (Motif 9)

C T G A A C G T A C T G A G T C A G T C C G T A A G T C G T A C A C G T C G A T G T C A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T C G T A C G T A A C T G C T A G A C G T A C T G C T A G A G T C C G T A G A C T
p-value:1e-9
log p-value:-2.159e+01
Information Content per bp:1.917
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.6 +/- 18.1bp
Average Position of motif in Background65.7 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ATGCCACCTTAAG
ATGCCAACC----
 C T G A A C G T A C T G A G T C A G T C C G T A A G T C G T A C A C G T C G A T G T C A C G T A A C T G
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:ATGCCACCTTAAG
-TGACACCT----
 C T G A A C G T A C T G A G T C A G T C C G T A A G T C G T A C A C G T C G A T G T C A C G T A A C T G
A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ATGCCACCTTAAG
ACTATGCCAACCTACC
 A C G T A C G T A C G T C T G A A C G T A C T G A G T C A G T C C G T A A G T C G T A C A C G T C G A T G T C A C G T A A C T G
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

PH0164.1_Six4/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ATGCCACCTTAAG
ATAAATGACACCTATCA
 A C G T A C G T A C G T A C G T C T G A A C G T A C T G A G T C A G T C C G T A A G T C G T A C A C G T C G A T G T C A C G T A A C T G
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

CREB3L1/MA0839.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ATGCCACCTTAAG-
ATGCCACGTCATCA
 C T G A A C G T A C T G A G T C A G T C C G T A A G T C G T A C A C G T C G A T G T C A C G T A A C T G A C G T
T C G A G A C T C T A G G T A C G A T C C T G A A T G C T C A G C G A T T G A C C T G A A G C T G A T C C T G A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ATGCCACCTTAAG
-TGTCANYT----
 C T G A A C G T A C T G A G T C A G T C C G T A A G T C G T A C A C G T C G A T G T C A C G T A A C T G
A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATGCCACCTTAAG
KTTCACACCT----
 A C G T C T G A A C G T A C T G A G T C A G T C C G T A A G T C G T A C A C G T C G A T G T C A C G T A A C T G
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ATGCCACCTTAAG
-TCACACCT----
 C T G A A C G T A C T G A G T C A G T C C G T A A G T C G T A C A C G T C G A T G T C A C G T A A C T G
A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ATGCCACCTTAAG
ATGCCCACC----
 C T G A A C G T A C T G A G T C A G T C C G T A A G T C G T A C A C G T C G A T G T C A C G T A A C T G
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ATGCCACCTTAAG
-TCACACCT----
 C T G A A C G T A C T G A G T C A G T C C G T A A G T C G T A C A C G T C G A T G T C A C G T A A C T G
A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T A C G T A C G T A C G T