Information for 6-CCATTTGTCCTCT (Motif 5)

A T G C A G T C C G T A A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A G C T
Reverse Opposite:
C T G A A C T G C G T A A C T G A C T G C G T A G T A C C G T A C G T A C G T A G A C T A C T G A T C G
p-value:1e-13
log p-value:-3.088e+01
Information Content per bp:1.905
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.7 +/- 29.7bp
Average Position of motif in Background65.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CCATTTGTCCTCT-
WCATTTTGKCCTCYT
 A C G T A T G C A G T C C G T A A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A G C T A C G T
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CCATTTGTCCTCT
-CCTTTGTTTT--
 A T G C A G T C C G T A A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A G C T
A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCATTTGTCCTCT-
-CNNTTGACCTTTG
 A T G C A G T C C G T A A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A G C T A C G T
A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

RARA/MA0729.1/Jaspar

Match Rank:4
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------CCATTTGTCCTCT
CATTGACCTTTTGACCTC-
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A G C T
T G A C G T C A C G A T A G C T C T A G C G T A G T A C G T A C A C G T G C A T G C A T A G C T A T C G T C G A G T A C A G T C A G C T G A T C A C G T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCATTTGTCCTCT
TGACCTTTTGACCTC-
 A C G T A C G T A C G T A T G C A G T C C G T A A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A G C T
A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C A C G T

Rarb/MA0857.1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCATTTGTCCTCT
TGACCTTTTGACCTTT
 A C G T A C G T A C G T A T G C A G T C C G T A A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A G C T
G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

Rarg/MA0859.1/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CCATTTGTCCTCT
TTGACCTTTTGACCTT-
 A C G T A C G T A C G T A C G T A T G C A G T C C G T A A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A G C T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T A C G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCATTTGTCCTCT--
GNNATTTGTCGTAANN
 A C G T A T G C A G T C C G T A A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A G C T A C G T A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CCATTTGTCCTCT
-----TGACCTYA
 A T G C A G T C C G T A A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCATTTGTCCTCT
-CCATTGTTNY--
 A T G C A G T C C G T A A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A G C T
A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T