Information for 5-SAGATCASCAGCA (Motif 7)

T A C G C G T A A C T G G T C A A G C T A T G C T G C A T A C G A G T C C G T A A T C G A G T C C T G A
Reverse Opposite:
A G C T A C T G A T G C C G A T A C T G A T G C A C G T A T C G T C G A A C G T A G T C A C G T A T G C
p-value:1e-10
log p-value:-2.397e+01
Information Content per bp:1.768
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif44.4
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets55.5 +/- 22.5bp
Average Position of motif in Background44.1 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRL/MA0842.1/Jaspar

Match Rank:1
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:SAGATCASCAGCA----
------GTCAGCANNTN
 T A C G C G T A A C T G G T C A A G C T A T G C T G C A T A C G A G T C C G T A A T C G A G T C C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.54
Offset:1
Orientation:forward strand
Alignment:SAGATCASCAGCA-----
-AATCGCACTGCATTCCG
 T A C G C G T A A C T G G T C A A G C T A T G C T G C A T A C G A G T C C G T A A T C G A G T C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.54
Offset:2
Orientation:forward strand
Alignment:SAGATCASCAGCA-
--SNGCACCTGCHS
 T A C G C G T A A C T G G T C A A G C T A T G C T G C A T A C G A G T C C G T A A T C G A G T C C T G A A C G T
A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:SAGATCASCAGCA---
-AGAGRRACAGCWGAC
 T A C G C G T A A C T G G T C A A G C T A T G C T G C A T A C G A G T C C G T A A T C G A G T C C T G A A C G T A C G T A C G T
A C G T T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.53
Offset:3
Orientation:forward strand
Alignment:SAGATCASCAGCA-----
---CCACACAGCAGGAGA
 T A C G C G T A A C T G G T C A A G C T A T G C T G C A T A C G A G T C C G T A A T C G A G T C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.53
Offset:6
Orientation:forward strand
Alignment:SAGATCASCAGCA-----
------CACAGCAGGGGG
 T A C G C G T A A C T G G T C A A G C T A T G C T G C A T A C G A G T C C G T A A T C G A G T C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.52
Offset:8
Orientation:forward strand
Alignment:SAGATCASCAGCA
--------CAGCC
 T A C G C G T A A C T G G T C A A G C T A T G C T G C A T A C G A G T C C G T A A T C G A G T C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:forward strand
Alignment:SAGATCASCAGCA-----
---CCACACAGCAGGAGA
 T A C G C G T A A C T G G T C A A G C T A T G C T G C A T A C G A G T C C G T A A T C G A G T C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.52
Offset:6
Orientation:forward strand
Alignment:SAGATCASCAGCA-
------ANCAGCTG
 T A C G C G T A A C T G G T C A A G C T A T G C T G C A T A C G A G T C C G T A A T C G A G T C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---SAGATCASCAGCA-
CATAAGACCACCATTAC
 A C G T A C G T A C G T T A C G C G T A A C T G G T C A A G C T A T G C T G C A T A C G A G T C C G T A A T C G A G T C C T G A A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T