Information for 11-ACTTACAGAC (Motif 14)

G T C A A G T C A G C T A G C T C T G A A G T C C G T A A C T G G T C A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C G T A C T G A G C T T C G A C T G A A C T G A C G T
p-value:1e-9
log p-value:-2.218e+01
Information Content per bp:1.875
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif35.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets37.7 +/- 26.7bp
Average Position of motif in Background49.3 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:ACTTACAGAC----
----CCAGACRSVB
 G T C A A G T C A G C T A G C T C T G A A G T C C G T A A C T G G T C A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:ACTTACAGAC--
----CCAGACAG
 G T C A A G T C A G C T A G C T C T G A A G T C C G T A A C T G G T C A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:ACTTACAGAC--
----BCAGACWA
 G T C A A G T C A G C T A G C T C T G A A G T C C G T A A C T G G T C A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ACTTACAGAC--
GGTTAGAGACCT
 G T C A A G T C A G C T A G C T C T G A A G T C C G T A A C T G G T C A A G T C A C G T A C G T
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ACTTACAGAC-
AGGTGHCAGACA
 A C G T G T C A A G T C A G C T A G C T C T G A A G T C C G T A A C T G G T C A A G T C A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ACTTACAGAC
TGAGTGACAGSC
 A C G T A C G T G T C A A G T C A G C T A G C T C T G A A G T C C G T A A C T G G T C A A G T C
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ACTTACAGAC------
CAAATCCAGACATCACA
 A C G T G T C A A G T C A G C T A G C T C T G A A G T C C G T A A C T G G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ACTTACAGAC-
-ATGCCAGACN
 G T C A A G T C A G C T A G C T C T G A A G T C C G T A A C T G G T C A A G T C A C G T
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:ACTTACAGAC
---CACAGN-
 G T C A A G T C A G C T A G C T C T G A A G T C C G T A A C T G G T C A A G T C
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ACTTACAGAC
VBTGWCAGCB
 G T C A A G T C A G C T A G C T C T G A A G T C C G T A A C T G G T C A A G T C
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C