Information for 8-CGGCACCTACCAG (Motif 11)

A G T C A C T G A C T G A G T C C G T A A G T C A G T C A C G T G T C A A G T C A G T C C G T A A T C G
Reverse Opposite:
A T G C A C G T C T A G A C T G A C G T C G T A A C T G A C T G A C G T A C T G A G T C G T A C A C T G
p-value:1e-10
log p-value:-2.479e+01
Information Content per bp:1.899
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.0 +/- 27.4bp
Average Position of motif in Background53.2 +/- 7.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HES7/MA0822.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CGGCACCTACCAG
TGGCACGTGCCA-
A G T C A C T G A C T G A G T C C G T A A G T C A G T C A C G T G T C A A G T C A G T C C G T A A T C G
G A C T T C A G T C A G G A T C T C G A A G T C C T A G G A C T T C A G G A T C A G T C C T G A A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CGGCACCTACCAG
SNGCACCTGCHS-
A G T C A C T G A C T G A G T C C G T A A G T C A G T C A C G T G T C A A G T C A G T C C G T A A T C G
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CGGCACCTACCAG
NNGGCGACACCTCNNN-
A C G T A C G T A C G T A C G T A G T C A C T G A C T G A G T C C G T A A G T C A G T C A C G T G T C A A G T C A G T C C G T A A T C G
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C A C G T

HES5/MA0821.1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CGGCACCTACCAG
CGGCACGTGCCA-
A G T C A C T G A C T G A G T C C G T A A G T C A G T C A C G T G T C A A G T C A G T C C G T A A T C G
G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A A C G T

ID4/MA0824.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CGGCACCTACCAG
-TACACCTGTC--
A G T C A C T G A C T G A G T C C G T A A G T C A G T C A C G T G T C A A G T C A G T C C G T A A T C G
A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CGGCACCTACCAG
--NCACCTGTN--
A G T C A C T G A C T G A G T C C G T A A G T C A G T C A C G T G T C A A G T C A G T C C G T A A T C G
A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGGCACCTACCAG
TGACACCT-----
A G T C A C T G A C T G A G T C C G T A A G T C A G T C A C G T G T C A A G T C A G T C C G T A A T C G
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGGCACCTACCAG
-NNCACCTGNN--
A G T C A C T G A C T G A G T C C G T A A G T C A G T C A C G T G T C A A G T C A G T C C G T A A T C G
A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CGGCACCTACCAG
--GCACGTACCC-
A G T C A C T G A C T G A G T C C G T A A G T C A G T C A C G T G T C A A G T C A G T C C G T A A T C G
A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C A C G T

TCF4/MA0830.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CGGCACCTACCAG
-CGCACCTGCT--
A G T C A C T G A C T G A G T C C G T A A G T C A G T C A C G T G T C A A G T C A G T C C G T A A T C G
A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T