Information for 6-NVTGACGTCA (Motif 5)

C G T A T A C G A C G T A T C G C G T A A G T C A C T G A C G T A T G C C G T A
Reverse Opposite:
A C G T A T C G C G T A A G T C A C T G G C A T A T G C C G T A A G T C G C A T
p-value:1e-19
log p-value:-4.441e+01
Information Content per bp:1.787
Number of Target Sequences with motif87.0
Percentage of Target Sequences with motif9.22%
Number of Background Sequences with motif1380.7
Percentage of Background Sequences with motif2.96%
Average Position of motif in Targets53.1 +/- 25.4bp
Average Position of motif in Background47.7 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRE(bZIP)/Promoter/Homer

Match Rank:1
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:NVTGACGTCA---
-GTGACGTCACCG
 C G T A T A C G A C G T A T C G C G T A A G T C A C T G A C G T A T G C C G T A A C G T A C G T A C G T
A C G T T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C T A G C T A C G

CREB1/MA0018.2/Jaspar

Match Rank:2
Score:0.94
Offset:2
Orientation:reverse strand
Alignment:NVTGACGTCA
--TGACGTCA
 C G T A T A C G A C G T A T C G C G T A A G T C A C T G A C G T A T G C C G T A
A C G T A C G T G C A T A C T G C T G A A G T C A T C G A C G T A T G C T C G A

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.94
Offset:0
Orientation:forward strand
Alignment:NVTGACGTCA
GATGACGTCA
 C G T A T A C G A C G T A T C G C G T A A G T C A C T G A C G T A T G C C G T A
T A C G T C G A G A C T A C T G C T G A A G T C T C A G G A C T T G A C C T G A

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:4
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:NVTGACGTCA---
-RTGACGTCAYCN
 C G T A T A C G A C G T A T C G C G T A A G T C A C T G A C G T A T G C C G T A A C G T A C G T A C G T
A C G T T C G A G A C T A C T G C G T A A G T C T C A G G A C T T G A C C T G A A G C T G A T C A T C G

PB0004.1_Atf1_1/Jaspar

Match Rank:5
Score:0.93
Offset:-2
Orientation:forward strand
Alignment:--NVTGACGTCA----
ACGATGACGTCATCGA
 A C G T A C G T C G T A T A C G A C G T A T C G C G T A A G T C A C T G A C G T A T G C C G T A A C G T A C G T A C G T A C G T
C G T A A G T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T G T A C C T A G C T G A

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:6
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-NVTGACGTCA-
NRRTGACGTCAT
 A C G T C G T A T A C G A C G T A T C G C G T A A G T C A C T G A C G T A T G C C G T A A C G T
A T G C T C A G T C G A G C A T A C T G C G T A A G T C T C A G G A C T T G A C C G T A A G C T

Creb5/MA0840.1/Jaspar

Match Rank:7
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:NVTGACGTCA--
NGTGACGTCATN
 C G T A T A C G A C G T A T C G C G T A A G T C A C T G A C G T A T G C C G T A A C G T A C G T
C T A G T C A G C G A T C A T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T A G C T

JDP2(var.2)/MA0656.1/Jaspar

Match Rank:8
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:NVTGACGTCA--
GATGACGTCATC
 C G T A T A C G A C G T A T C G C G T A A G T C A C T G A C G T A T G C C G T A A C G T A C G T
A C T G T C G A A C G T A C T G C T G A A G T C T C A G A C G T G T A C C T G A A G C T A T G C

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:9
Score:0.91
Offset:1
Orientation:forward strand
Alignment:NVTGACGTCA---
-ATGACGTCATCN
 C G T A T A C G A C G T A T C G C G T A A G T C A C T G A C G T A T G C C G T A A C G T A C G T A C G T
A C G T T C G A A C G T A C T G C T G A A G T C T C A G A G C T G T A C C G T A A G C T G A T C T C G A

ATF7/MA0834.1/Jaspar

Match Rank:10
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-NVTGACGTCA---
NGATGACGTCATNN
 A C G T C G T A T A C G A C G T A T C G C G T A A G T C A C T G A C G T A T G C C G T A A C G T A C G T A C G T
A G T C C A T G T C G A G A C T A C T G G T C A A G T C T C A G G A C T G T A C G T C A A G C T G A T C T C A G