Information for 17-GTCMGCCKWGSCT (Motif 18)

A C T G A G C T A T G C G T C A A C T G A G T C A G T C A C G T C G T A A C T G A T C G A G T C A C G T
Reverse Opposite:
C G T A A C T G A T G C A G T C C G A T G T C A A C T G A C T G A G T C A C G T A T C G C T G A G T A C
p-value:1e-8
log p-value:-1.892e+01
Information Content per bp:1.870
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.0 +/- 22.0bp
Average Position of motif in Background54.8 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GTCMGCCKWGSCT
CAACGTCCGCGG-----
 A C G T A C G T A C G T A C G T A C T G A G C T A T G C G T C A A C T G A G T C A G T C A C G T C G T A A C T G A T C G A G T C A C G T
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GTCMGCCKWGSCT
TGAGTCAGCA------
 A C G T A C G T A C G T A C T G A G C T A T G C G T C A A C T G A G T C A G T C A C G T C G T A A C T G A T C G A G T C A C G T
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GTCMGCCKWGSCT--
GTCWGCTGTYYCTCT
 A C T G A G C T A T G C G T C A A C T G A G T C A G T C A C G T C G T A A C T G A T C G A G T C A C G T A C G T A C G T
C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GTCMGCCKWGSCT--
GTCATGCHTGRCTGS
 A C T G A G C T A T G C G T C A A C T G A G T C A G T C A C G T C G T A A C T G A T C G A G T C A C G T A C G T A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GTCMGCCKWGSCT--
NGTCACGCTTGGCTGC
 A C G T A C T G A G C T A T G C G T C A A C T G A G T C A G T C A C G T C G T A A C T G A T C G A G T C A C G T A C G T A C G T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

NRL/MA0842.1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GTCMGCCKWGSCT
GTCAGCANNTN--
 A C T G A G C T A T G C G T C A A C T G A G T C A G T C A C G T C G T A A C T G A T C G A G T C A C G T
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GTCMGCCKWGSCT
NGTCAGCANTTT--
 A C G T A C T G A G C T A T G C G T C A A C T G A G T C A G T C A C G T C G T A A C T G A T C G A G T C A C G T
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GTCMGCCKWGSCT
AGGTCACCCTGACCT
 A C G T A C G T A C T G A G C T A T G C G T C A A C T G A G T C A G T C A C G T C G T A A C T G A T C G A G T C A C G T
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.51
Offset:7
Orientation:forward strand
Alignment:GTCMGCCKWGSCT--
-------TWGTCTGV
 A C T G A G C T A T G C G T C A A C T G A G T C A G T C A C G T C G T A A C T G A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GTCMGCCKWGSCT-
---NNACTTGCCTT
 A C T G A G C T A T G C G T C A A C T G A G T C A G T C A C G T C G T A A C T G A T C G A G T C A C G T A C G T
A C G T A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T