Information for 6-CCCAYGGACAYCTGCT (Motif 9)

G T A C A G T C A G T C C G T A A G C T C A T G A C T G T C G A A G T C G C T A A G C T G T A C A G C T A C T G A G T C G C A T
Reverse Opposite:
C G T A A C T G A G T C C T G A A C T G T C G A C G A T A C T G A G C T A G T C G T A C T C G A A C G T A C T G T A C G A C T G
p-value:1e-13
log p-value:-3.014e+01
Information Content per bp:1.712
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.3 +/- 24.9bp
Average Position of motif in Background46.0 +/- 11.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CCCAYGGACAYCTGCT-
-----SNGCACCTGCHS
 G T A C A G T C A G T C C G T A A G C T C A T G A C T G T C G A A G T C G C T A A G C T G T A C A G C T A C T G A G T C G C A T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

PB0047.1_Myf6_1/Jaspar

Match Rank:2
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CCCAYGGACAYCTGCT----
----CNGACACCTGTTCNNN
 G T A C A G T C A G T C C G T A A G C T C A T G A C T G T C G A A G T C G C T A A G C T G T A C A G C T A C T G A G T C G C A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C T A G T C A G T G C A A G T C C T G A T G A C A T G C C G A T C T A G A G C T A G C T T A G C G A C T A G C T A G T C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCCAYGGACAYCTGCT---
--CCNNACCATCTGGCCTN
 G T A C A G T C A G T C C G T A A G C T C A T G A C T G T C G A A G T C G C T A A G C T G T A C A G C T A C T G A G T C G C A T A C G T A C G T A C G T
A C G T A C G T A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCCAYGGACAYCTGCT
--CAAGGHCANV----
 G T A C A G T C A G T C C G T A A G C T C A T G A C T G T C G A A G T C G C T A A G C T G T A C A G C T A C T G A G T C G C A T
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:5
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CCCAYGGACAYCTGCT
TCAGCACCATGGACAGCTCC-
 A C G T A C G T A C G T A C G T A C G T G T A C A G T C A G T C C G T A A G C T C A T G A C T G T C G A A G T C G C T A A G C T G T A C A G C T A C T G A G T C G C A T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:6
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CCCAYGGACAYCTGCT--
------GCCAGCTGBTNB
 G T A C A G T C A G T C C G T A A G C T C A T G A C T G T C G A A G T C G C T A A G C T G T A C A G C T A C T G A G T C G C A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCCAYGGACAYCTGCT
NTCAAGGTCA------
 G T A C A G T C A G T C C G T A A G C T C A T G A C T G T C G A A G T C G C T A A G C T G T A C A G C T A C T G A G T C G C A T
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CCCAYGGACAYCTGCT
-----NNACAGCTGC-
 G T A C A G T C A G T C C G T A A G C T C A T G A C T G T C G A A G T C G C T A A G C T G T A C A G C T A C T G A G T C G C A T
A C G T A C G T A C G T A C G T A C G T C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T

ID4/MA0824.1/Jaspar

Match Rank:9
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CCCAYGGACAYCTGCT
------TACACCTGTC
 G T A C A G T C A G T C C G T A A G C T C A T G A C T G T C G A A G T C G C T A A G C T G T A C A G C T A C T G A G T C G C A T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:10
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CCCAYGGACAYCTGCT--
------NVCAGCTGBBNN
 G T A C A G T C A G T C C G T A A G C T C A T G A C T G T C G A A G T C G C T A A G C T G T A C A G C T A C T G A G T C G C A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C