Information for 5-CAGSAACAGCATKGGG (Motif 6)

A T G C C G T A A C T G T A G C C G T A C T G A G T A C C G T A A C T G A T G C C G T A G C A T C A T G A C T G T C A G C T A G
Reverse Opposite:
A G T C A G T C A G T C G T A C C G T A A C G T T A C G A G T C A C G T A C T G A G C T A C G T A T C G A G T C A C G T A T C G
p-value:1e-15
log p-value:-3.531e+01
Information Content per bp:1.772
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.5 +/- 24.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CAGSAACAGCATKGGG
-TGGAACAGMA-----
 A T G C C G T A A C T G T A G C C G T A C T G A G T A C C G T A A C T G A T G C C G T A G C A T C A T G A C T G T C A G C T A G
A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CAGSAACAGCATKGGG
CCAGGAACAG-------
 A C G T A T G C C G T A A C T G T A G C C G T A C T G A G T A C C G T A A C T G A T G C C G T A G C A T C A T G A C T G T C A G C T A G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAGSAACAGCATKGGG---
GAAGTANCACGAATNMRAGT
 A C G T A T G C C G T A A C T G T A G C C G T A C T G A G T A C C G T A A C T G A T G C C G T A G C A T C A T G A C T G T C A G C T A G A C G T A C G T A C G T
C T A G C T G A C T G A C T A G G A C T C T G A T A C G A G T C G C T A G A T C C T A G T C G A T G C A G A C T A C G T G T C A T C A G C T G A C A T G G A C T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CAGSAACAGCATKGGG
SCCTAGCAACAG-------
 A C G T A C G T A C G T A T G C C G T A A C T G T A G C C G T A C T G A G T A C C G T A A C T G A T G C C G T A G C A T C A T G A C T G T C A G C T A G
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CAGSAACAGCATKGGG
----AACAGGAAGT--
 A T G C C G T A A C T G T A G C C G T A C T G A G T A C C G T A A C T G A T G C C G T A G C A T C A T G A C T G T C A G C T A G
A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CAGSAACAGCATKGGG
----CACAGN------
 A T G C C G T A A C T G T A G C C G T A C T G A G T A C C G T A A C T G A T G C C G T A G C A T C A T G A C T G T C A G C T A G
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CAGSAACAGCATKGGG
----CACAGCAGGGGG
 A T G C C G T A A C T G T A G C C G T A C T G A G T A C C G T A A C T G A T G C C G T A G C A T C A T G A C T G T C A G C T A G
A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

SCRT2/MA0744.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CAGSAACAGCATKGGG
ATGCAACAGGTGG---
 A T G C C G T A A C T G T A G C C G T A C T G A G T A C C G T A A C T G A T G C C G T A G C A T C A T G A C T G T C A G C T A G
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G A C G T A C G T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CAGSAACAGCATKGGG-
-----ACAGGATGTGGT
 A T G C C G T A A C T G T A G C C G T A C T G A G T A C C G T A A C T G A T G C C G T A G C A T C A T G A C T G T C A G C T A G A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:10
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CAGSAACAGCATKGGG
ADGGYAGYAGCATCT-----
 A C G T A C G T A C G T A C G T A T G C C G T A A C T G T A G C C G T A C T G A G T A C C G T A A C T G A T G C C G T A G C A T C A T G A C T G T C A G C T A G
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T A C G T A C G T A C G T A C G T