Information for 4-AVCTDCATGCACATGT (Motif 5)

C T G A T A G C G T A C A G C T C G T A A G T C C T G A C A G T A T C G A G T C C G T A A G T C C G T A A G C T C T A G A G C T
Reverse Opposite:
C T G A A G T C C T G A A C G T C T A G C G A T A C T G A T G C G T C A A G C T A C T G G A C T C T G A A C T G A C T G A G C T
p-value:1e-15
log p-value:-3.531e+01
Information Content per bp:1.745
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.4 +/- 21.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AVCTDCATGCACATGT--
-TACATGTGCACATAAAA
 C T G A T A G C G T A C A G C T C G T A A G T C C T G A C A G T A T C G A G T C C G T A A G T C C G T A A G C T C T A G A G C T A C G T A C G T
A C G T C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

Myc/MA0147.2/Jaspar

Match Rank:2
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:AVCTDCATGCACATGT
------AAGCACATGG
 C T G A T A G C G T A C A G C T C G T A A G T C C T G A C A G T A T C G A G T C C G T A A G T C C G T A A G C T C T A G A G C T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AVCTDCATGCACATGT----
----CGAAGCACACAAAATA
 C T G A T A G C G T A C A G C T C G T A A G T C C T G A C A G T A T C G A G T C C G T A A G T C C G T A A G C T C T A G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AVCTDCATGCACATGT
----CCAGGAACAG--
 C T G A T A G C G T A C A G C T C G T A A G T C C T G A C A G T A T C G A G T C C G T A A G T C C G T A A G C T C T A G A G C T
A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AVCTDCATGCACATGT---
---NNTTTGCACACGGCCC
 C T G A T A G C G T A C A G C T C G T A A G T C C T G A C A G T A T C G A G T C C G T A A G T C C G T A A G C T C T A G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

POU2F2/MA0507.1/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AVCTDCATGCACATGT-
----ATATGCAAATNNN
 C T G A T A G C G T A C A G C T C G T A A G T C C T G A C A G T A T C G A G T C C G T A A G T C C G T A A G C T C T A G A G C T A C G T
A C G T A C G T A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Twist2/MA0633.1/Jaspar

Match Rank:7
Score:0.56
Offset:9
Orientation:reverse strand
Alignment:AVCTDCATGCACATGT---
---------NACATATGGN
 C T G A T A G C G T A C A G C T C G T A A G T C C T G A C A G T A T C G A G T C C G T A A G T C C G T A A G C T C T A G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T

PB0026.1_Gm397_1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AVCTDCATGCACATGT-
NNGTATGTGCACATNNN
 C T G A T A G C G T A C A G C T C G T A A G T C C T G A C A G T A T C G A G T C C G T A A G T C C G T A A G C T C T A G A G C T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

PH0087.1_Irx6/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AVCTDCATGCACATGT
AAAATACATGTAAAAAT
 A C G T C T G A T A G C G T A C A G C T C G T A A G T C C T G A C A G T A T C G A G T C C G T A A G T C C G T A A G C T C T A G A G C T
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

ZBTB18/MA0698.1/Jaspar

Match Rank:10
Score:0.53
Offset:5
Orientation:forward strand
Alignment:AVCTDCATGCACATGT--
-----CATCCAGATGTTC
 C T G A T A G C G T A C A G C T C G T A A G T C C T G A C A G T A T C G A G T C C G T A A G T C C G T A A G C T C T A G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C G T T G A C G T A C C G T A A T C G G T C A A C G T C T A G G A C T C A G T A G T C