Information for 25-CTGTGWKCCAGKG (Motif 47)

G T A C A C G T A C T G A C G T A C T G C G A T C A G T A G T C A G T C C G T A A C T G A C G T C T A G
Reverse Opposite:
A G T C G T C A A G T C A C G T A C T G C T A G G T A C C G T A A G T C C G T A A G T C C G T A A C T G
p-value:1e-4
log p-value:-1.010e+01
Information Content per bp:1.882
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets61.8 +/- 24.7bp
Average Position of motif in Background47.1 +/- 20.3bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CTGTGWKCCAGKG
--CTGTTCCTGG-
 G T A C A C G T A C T G A C G T A C T G C G A T C A G T A G T C A G T C C G T A A C T G A C G T C T A G
A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTGTGWKCCAGKG
GCTGTG--------
 A C G T G T A C A C G T A C T G A C G T A C T G C G A T C A G T A G T C A G T C C G T A A C T G A C G T C T A G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CTGTGWKCCAGKG
NNNNTTGTGTGCTTNN-
 A C G T A C G T A C G T A C G T G T A C A C G T A C T G A C G T A C T G C G A T C A G T A G T C A G T C C G T A A C T G A C G T C T A G
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTGTGWKCCAGKG----
-NNNNTGCCAGTGATTG
 G T A C A C G T A C T G A C G T A C T G C G A T C A G T A G T C A G T C C G T A A C T G A C G T C T A G A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTGTGWKCCAGKG
YCTTTGTTCC----
 A C G T G T A C A C G T A C T G A C G T A C T G C G A T C A G T A G T C A G T C C G T A A C T G A C G T C T A G
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CTGTGWKCCAGKG
NNGCGTGTGTGCNGCN-
 A C G T A C G T A C G T A C G T G T A C A C G T A C T G A C G T A C T G C G A T C A G T A G T C A G T C C G T A A C T G A C G T C T A G
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CTGTGWKCCAGKG------
---TGACCCAGTGACCTAC
 G T A C A C G T A C T G A C G T A C T G C G A T C A G T A G T C A G T C C G T A A C T G A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CTGTGWKCCAGKG
TGGCAGNCTGCCAG--
 A C G T A C G T A C G T G T A C A C G T A C T G A C G T A C T G C G A T C A G T A G T C A G T C C G T A A C T G A C G T C T A G
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CTGTGWKCCAGKG
GSCTGTCACTCA---
 A C G T A C G T G T A C A C G T A C T G A C G T A C T G C G A T C A G T A G T C A G T C C G T A A C T G A C G T C T A G
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CTGTGWKCCAGKG
-----TGCCAA--
 G T A C A C G T A C T G A C G T A C T G C G A T C A G T A G T C A G T C C G T A A C T G A C G T C T A G
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T