Information for 22-CCTTGCCAGT (Motif 43)

A G T C A G T C A C G T A C G T A C T G A G T C A G T C C G T A A C T G A C G T
Reverse Opposite:
C G T A G T A C A C G T A C T G A C T G A G T C C G T A G T C A A C T G A C T G
p-value:1e-6
log p-value:-1.508e+01
Information Content per bp:1.942
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif9.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets62.3 +/- 22.5bp
Average Position of motif in Background39.2 +/- 13.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CCTTGCCAGT
-CTTGGCAA-
 A G T C A G T C A C G T A C G T A C T G A G T C A G T C C G T A A C T G A C G T
A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CCTTGCCAGT-----
NNNNTGCCAGTGATTG
 A C G T A G T C A G T C A C G T A C G T A C T G A G T C A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CCTTGCCAGT
-CGTGCCAAG
 A G T C A G T C A C G T A C G T A C T G A G T C A G T C C G T A A C T G A C G T
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CCTTGCCAGT
---TGCCAA-
 A G T C A G T C A C G T A C G T A C T G A G T C A G T C C G T A A C T G A C G T
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CCTTGCCAGT
NNACTTGCCTT-
 A C G T A C G T A G T C A G T C A C G T A C G T A C T G A G T C A G T C C G T A A C T G A C G T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T

Myb/MA0100.2/Jaspar

Match Rank:6
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CCTTGCCAGT---
---TGGCAGTTGN
 A G T C A G T C A C G T A C G T A C T G A G T C A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCTTGCCAGT-
-GGTGCCAAGT
 A G T C A G T C A C G T A C G T A C T G A G T C A G T C C G T A A C T G A C G T A C G T
A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CCTTGCCAGT-
---TGTCANYT
 A G T C A G T C A C G T A C G T A C T G A G T C A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCTTGCCAGT-
--CTGCCCGCA
 A G T C A G T C A C G T A C G T A C T G A G T C A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CCTTGCCAGT
BNTGDCCTTG-----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C T G A G T C A G T C C G T A A C T G A C G T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T