p-value: | 1e-6 |
log p-value: | -1.554e+01 |
Information Content per bp: | 1.899 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.50% |
Number of Background Sequences with motif | 0.4 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 42.4 +/- 21.3bp |
Average Position of motif in Background | 53.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 1.25 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
REST/MA0138.2/Jaspar
Match Rank: | 1 |
Score: | 0.71 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CCAGCACGTTGCCCAG---- TTCAGCACCATGGACAGCGCC |
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REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer
Match Rank: | 2 |
Score: | 0.70 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CCAGCACGTTGCCCAG---- TCAGCACCATGGACAGCTCC |
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ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 3 |
Score: | 0.62 |
Offset: | 9 |
Orientation: | reverse strand |
Alignment: | CCAGCACGTTGCCCAG--- ---------TGCCCAGNHW |
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HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer
Match Rank: | 4 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CCAGCACGTTGCCCAG ---GCACGTACCC--- |
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HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer
Match Rank: | 5 |
Score: | 0.54 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CCAGCACGTTGCCCAG ---GCACGTAY----- |
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ARNT::HIF1A/MA0259.1/Jaspar
Match Rank: | 6 |
Score: | 0.53 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CCAGCACGTTGCCCAG ---GCACGTNC----- |
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Mafb/MA0117.2/Jaspar
Match Rank: | 7 |
Score: | 0.53 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCAGCACGTTGCCCAG NGTCAGCANTTT------ |
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NRL/MA0842.1/Jaspar
Match Rank: | 8 |
Score: | 0.53 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CCAGCACGTTGCCCAG GTCAGCANNTN------ |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 9 |
Score: | 0.52 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCAGCACGTTGCCCAG DCHCAGCAGGRGGCC--- |
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MAX::MYC/MA0059.1/Jaspar
Match Rank: | 10 |
Score: | 0.52 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CCAGCACGTTGCCCAG -GACCACGTGGT---- |
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