Information for 19-CTCTAGAGGA (Motif 36)

G T A C C A G T A G T C G C A T C G T A A C T G C G T A A C T G A C T G C G T A
Reverse Opposite:
G A C T A G T C A G T C A C G T A G T C G C A T C G T A A C T G G C T A A C T G
p-value:1e-7
log p-value:-1.800e+01
Information Content per bp:1.851
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif13.7
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets39.7 +/- 35.5bp
Average Position of motif in Background55.5 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIB/MA0081.1/Jaspar

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CTCTAGAGGA-
----AGAGGAA
 G T A C C A G T A G T C G C A T C G T A A C T G C G T A A C T G A C T G C G T A A C G T
A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A

PB0006.1_Bcl6b_1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTCTAGAGGA-----
TCTTTCGAGGAATTTG
 A C G T G T A C C A G T A G T C G C A T C G T A A C T G C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
C G A T G A T C G A C T C G A T C G A T A G T C A C T G C G T A T C A G C A T G C G T A G C T A G A C T G C A T G A C T T A C G

SMAD3/MA0795.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTCTAGAGGA
TGTCTAGACG-
 A C G T G T A C C A G T A G T C G C A T C G T A A C T G C G T A A C T G A C T G C G T A
C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CTCTAGAGGA----
----AGAGGAAGTG
 G T A C C A G T A G T C G C A T C G T A A C T G C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

Bcl6/MA0463.1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTCTAGAGGA--
NGCTTTCTAGGAAN
 A C G T A C G T G T A C C A G T A G T C G C A T C G T A A C T G C G T A A C T G A C T G C G T A A C G T A C G T
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTCTAGAGGA
BTBRAGTGSN
 G T A C C A G T A G T C G C A T C G T A A C T G C G T A A C T G A C T G C G T A
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CTCTAGAGGA
BCNGGTTCTAGANCN
 A C G T A C G T A C G T A C G T A C G T G T A C C A G T A G T C G C A T C G T A A C T G C G T A A C T G A C T G C G T A
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

PH0111.1_Nkx2-2/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CTCTAGAGGA---
NANTTTCAAGTGGTTAN
 A C G T A C G T A C G T A C G T G T A C C A G T A G T C G C A T C G T A A C T G C G T A A C T G A C T G C G T A A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CTCTAGAGGA
----TGGGGA
 G T A C C A G T A G T C G C A T C G T A A C T G C G T A A C T G A C T G C G T A
A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CTCTAGAGGA
RSCACTYRAG--
 A C G T A C G T G T A C C A G T A G T C G C A T C G T A A C T G C G T A A C T G A C T G C G T A
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T