Information for 16-AGAGTGTATG (Motif 31)

C G T A T A C G C T G A C T A G C G A T T A C G C G A T T C G A C A G T A C T G
Reverse Opposite:
T G A C G T C A A G C T G C T A A T G C G C T A G A T C G A C T A T G C G C A T
p-value:1e-8
log p-value:-1.985e+01
Information Content per bp:1.662
Number of Target Sequences with motif79.0
Percentage of Target Sequences with motif9.80%
Number of Background Sequences with motif837.0
Percentage of Background Sequences with motif4.78%
Average Position of motif in Targets56.1 +/- 22.6bp
Average Position of motif in Background51.0 +/- 39.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AGAGTGTATG-----
NNGCGTGTGTGCNGCN
 A C G T C G T A T A C G C T G A C T A G C G A T T A C G C G A T T C G A C A G T A C T G A C G T A C G T A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGAGTGTATG
TTRAGTGSYK-
 A C G T C G T A T A C G C T G A C T A G C G A T T A C G C G A T T C G A C A G T A C T G
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGAGTGTATG
TTGAGTGSTT-
 A C G T C G T A T A C G C T G A C T A G C G A T T A C G C G A T T C G A C A G T A C T G
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AGAGTGTATG
---GTGGAT-
 C G T A T A C G C T G A C T A G C G A T T A C G C G A T T C G A C A G T A C T G
A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGAGTGTATG
CTTGAGTGGCT-
 A C G T A C G T C G T A T A C G C T G A C T A G C G A T T A C G C G A T T C G A C A G T A C T G
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGAGTGTATG-----
CCATTGTATGCAAAT
 C G T A T A C G C T G A C T A G C G A T T A C G C G A T T C G A C A G T A C T G A C G T A C G T A C G T A C G T A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGAGTGTATG-
-VBSYGTCTGG
 C G T A T A C G C T G A C T A G C G A T T A C G C G A T T C G A C A G T A C T G A C G T
A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGAGTGTATG---
-GGGGGTGTGTCC
 C G T A T A C G C T G A C T A G C G A T T A C G C G A T T C G A C A G T A C T G A C G T A C G T A C G T
A C G T T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGAGTGTATG-
GAAAGTGAAAGT
 A C G T C G T A T A C G C T G A C T A G C G A T T A C G C G A T T C G A C A G T A C T G A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

PRDM1/MA0508.1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AGAGTGTATG---
AGAAAGTGAAAGTGA
 A C G T A C G T C G T A T A C G C T G A C T A G C G A T T A C G C G A T T C G A C A G T A C T G A C G T A C G T A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A