Information for 15-GAGCACGCAC (Motif 25)

C T A G G T C A A C T G A T G C G C T A G T A C A T C G A G T C C G T A A T G C
Reverse Opposite:
A T C G G C A T A C T G T A G C C A T G C A G T A T C G A G T C A C G T A G T C
p-value:1e-9
log p-value:-2.091e+01
Information Content per bp:1.829
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.98%
Number of Background Sequences with motif110.3
Percentage of Background Sequences with motif0.63%
Average Position of motif in Targets53.7 +/- 29.2bp
Average Position of motif in Background49.5 +/- 33.4bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:GAGCACGCAC
---CACGCA-
 C T A G G T C A A C T G A T G C G C T A G T A C A T C G A G T C C G T A A T G C
A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GAGCACGCAC
TBGCACGCAA
 C T A G G T C A A C T G A T G C G C T A G T A C A T C G A G T C C G T A A T G C
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

NRF1/MA0506.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GAGCACGCAC
TGCGCAGGCGC
 A C G T C T A G G T C A A C T G A T G C G C T A G T A C A T C G A G T C C G T A A T G C
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GAGCACGCAC-
GGACCACCCACG
 A C G T C T A G G T C A A C T G A T G C G C T A G T A C A T C G A G T C C G T A A T G C A C G T
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

PB0095.1_Zfp161_1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GAGCACGCAC----
TGGCGCGCGCGCCTGA
 A C G T A C G T C T A G G T C A A C T G A T G C G C T A G T A C A T C G A G T C C G T A A T G C A C G T A C G T A C G T A C G T
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A

PB0130.1_Gm397_2/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GAGCACGCAC----
AGCGGCACACACGCAA
 A C G T A C G T C T A G G T C A A C T G A T G C G C T A G T A C A T C G A G T C C G T A A T G C A C G T A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GAGCACGCAC
CTGCGCATGCGC
 A C G T A C G T C T A G G T C A A C T G A T G C G C T A G T A C A T C G A G T C C G T A A T G C
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GAGCACGCAC
--GCACGTNC
 C T A G G T C A A C T G A T G C G C T A G T A C A T C G A G T C C G T A A T G C
A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

Klf12/MA0742.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAGCACGCAC-----
GACCACGCCCTTATT
 C T A G G T C A A C T G A T G C G C T A G T A C A T C G A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T
C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:10
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GAGCACGCAC
--GCACGTAY
 C T A G G T C A A C T G A T G C G C T A G T A C A T C G A G T C C G T A A T G C
A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T