Information for 13-AGTGGAGTAA (Motif 22)

C T G A A C T G A C G T A C T G A C T G C T G A C A T G A C G T G T C A C G T A
Reverse Opposite:
A C G T A C G T G T C A G A T C A G C T A G T C G T A C G T C A A G T C A G C T
p-value:1e-9
log p-value:-2.190e+01
Information Content per bp:1.850
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif20.5
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets47.5 +/- 21.3bp
Average Position of motif in Background44.6 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:AGTGGAGTAA
-GTGGAT---
 C T G A A C T G A C G T A C T G A C T G C T G A C A T G A C G T G T C A C G T A
A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T

PH0121.1_Obox1/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AGTGGAGTAA----
TTAAGGGGATTAACTAC
 A C G T A C G T A C G T C T G A A C T G A C G T A C T G A C T G C T G A C A T G A C G T G T C A C G T A A C G T A C G T A C G T A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGTGGAGTAA---
-GTGGCGTGACNG
 C T G A A C T G A C G T A C T G A C T G C T G A C A T G A C G T G T C A C G T A A C G T A C G T A C G T
A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

PH0129.1_Otx1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AGTGGAGTAA-----
AGAGGGGATTAATTTAT
 A C G T A C G T C T G A A C T G A C G T A C T G A C T G C T G A C A T G A C G T G T C A C G T A A C G T A C G T A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

Crx/MA0467.1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGTGGAGTAA
AAGAGGATTAG
 A C G T C T G A A C T G A C G T A C T G A C T G C T G A C A T G A C G T G T C A C G T A
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

PH0123.1_Obox3/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGTGGAGTAA----
TGAGGGGGATTAACTAT
 A C G T A C G T A C G T C T G A A C T G A C G T A C T G A C T G C T G A C A T G A C G T G T C A C G T A A C G T A C G T A C G T A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGTGGAGTAA-
-ATGGGGTGAT
 C T G A A C T G A C G T A C T G A C T G C T G A C A T G A C G T G T C A C G T A A C G T
A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

PH0122.1_Obox2/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGTGGAGTAA----
TGAGGGGGATTAACTAT
 A C G T A C G T A C G T C T G A A C T G A C G T A C T G A C T G C T G A C A T G A C G T G T C A C G T A A C G T A C G T A C G T A C G T
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T

PH0137.1_Pitx1/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGTGGAGTAA----
TTAGAGGGATTAACAAT
 A C G T A C G T A C G T C T G A A C T G A C G T A C T G A C T G C T G A C A T G A C G T G T C A C G T A A C G T A C G T A C G T A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

PH0126.1_Obox6/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGTGGAGTAA--
AAAAACGGATTATTG
 A C G T A C G T A C G T C T G A A C T G A C G T A C T G A C T G C T G A C A T G A C G T G T C A C G T A A C G T A C G T
G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G