Information for 14-TTAGCAGTAC (Motif 23)

A C G T A C G T G T C A A T C G A T G C C G T A A C T G A C G T C T G A A G T C
Reverse Opposite:
A C T G G A C T G T C A G T A C A C G T A T C G A T G C C A G T C G T A G T C A
p-value:1e-8
log p-value:-2.041e+01
Information Content per bp:1.849
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif33.1
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets61.3 +/- 22.7bp
Average Position of motif in Background53.2 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTAGCAGTAC-------
TTCNAAGTACTTNNNNN
 A C G T A C G T G T C A A T C G A T G C C G T A A C T G A C G T C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTAGCAGTAC
NNTTGGCANN--
 A C G T A C G T A C G T A C G T G T C A A T C G A T G C C G T A A C T G A C G T C T G A A G T C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:3
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------TTAGCAGTAC-
NTNTTCTTATCAGTNTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T C G A T G C C G T A A C T G A C G T C T G A A G T C A C G T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TTAGCAGTAC
BTVATTWGCATA--
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T C G A T G C C G T A A C T G A C G T C T G A A G T C
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TTAGCAGTAC
GTCAGCANNTN
 A C G T A C G T A C G T G T C A A T C G A T G C C G T A A C T G A C G T C T G A A G T C
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTAGCAGTAC
CTCATTTGCATW--
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T C G A T G C C G T A A C T G A C G T C T G A A G T C
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T A C G T

PH0116.1_Nkx2-9/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTAGCAGTAC-------
TTTTAAGTACTTAAATT
 A C G T A C G T G T C A A T C G A T G C C G T A A C T G A C G T C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TTAGCAGTAC
CTTGGCAA---
 A C G T A C G T A C G T G T C A A T C G A T G C C G T A A C T G A C G T C T G A A G T C
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TTAGCAGTAC
ATTTGCATAA-
 A C G T A C G T A C G T G T C A A T C G A T G C C G T A A C T G A C G T C T G A A G T C
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TTAGCAGTAC
TAATTTGCATAA-
 A C G T A C G T A C G T A C G T A C G T G T C A A T C G A T G C C G T A A C T G A C G T C T G A A G T C
C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A A C G T