Information for 8-CTGCTTGCCACCCTCC (Motif 20)

A G T C A C G T A C T G A G T C A C G T A C G T A C T G A G T C A G T C C T G A A G T C A G T C A G T C C G A T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C T G A C T G A C T G A G C T C T A G A C T G A G T C G T C A C G T A A C T G A G T C C G T A A C T G
p-value:1e-9
log p-value:-2.119e+01
Information Content per bp:1.924
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.2 +/- 17.6bp
Average Position of motif in Background32.5 +/- 1.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CTGCTTGCCACCCTCC-
-ACTATGCCAACCTACC
 A G T C A C G T A C T G A G T C A C G T A C G T A C T G A G T C A G T C C T G A A G T C A G T C A G T C C G A T A G T C A G T C A C G T
A C G T C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CTGCTTGCCACCCTCC
----ATGCCAACC---
 A G T C A C G T A C T G A G T C A C G T A C G T A C T G A G T C A G T C C T G A A G T C A G T C A G T C C G A T A G T C A G T C
A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTGCTTGCCACCCTCC
TTGCGTGCVA------
 A G T C A C G T A C T G A G T C A C G T A C G T A C T G A G T C A G T C C T G A A G T C A G T C A G T C C G A T A G T C A G T C
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:4
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CTGCTTGCCACCCTCC
CCTTCCTTCCTTCCTTCC
 A C G T A C G T A G T C A C G T A C T G A G T C A C G T A C G T A C T G A G T C A G T C C T G A A G T C A G T C A G T C C G A T A G T C A G T C
A G T C G A T C G A C T C A G T A T G C A G T C A C G T A C G T A T G C G T A C A G C T A G C T G A T C A G T C A G C T A G C T A G T C A G T C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CTGCTTGCCACCCTCC
CTGTCTGTCACCT---
 A G T C A C G T A C T G A G T C A C G T A C G T A C T G A G T C A G T C C T G A A G T C A G T C A G T C C G A T A G T C A G T C
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T A C G T A C G T

ZNF263/MA0528.1/Jaspar

Match Rank:6
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CTGCTTGCCACCCTCC---
TCCTCCTCCCCCTCCTCCTCC
 A C G T A C G T A G T C A C G T A C T G A G T C A C G T A C G T A C T G A G T C A G T C C T G A A G T C A G T C A G T C C G A T A G T C A G T C A C G T A C G T A C G T
G A C T G A T C G A T C G A C T G A T C G A T C G A C T A G T C G A T C G A T C G A T C A G T C A G C T A G T C G T A C C G A T A T G C G T A C G A C T A G T C G A T C

E2F6/MA0471.1/Jaspar

Match Rank:7
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CTGCTTGCCACCCTCC
--NCTTCCCGCCC---
 A G T C A C G T A C T G A G T C A C G T A C G T A C T G A G T C A G T C C T G A A G T C A G T C A G T C C G A T A G T C A G T C
A C G T A C G T A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CTGCTTGCCACCCTCC
---CTTGGCAA-----
 A G T C A C G T A C T G A G T C A C G T A C G T A C T G A G T C A G T C C T G A A G T C A G T C A G T C C G A T A G T C A G T C
A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:9
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CTGCTTGCCACCCTCC-
ATAAATGACACCTATCA
 A G T C A C G T A C T G A G T C A C G T A C G T A C T G A G T C A G T C C T G A A G T C A G T C A G T C C G A T A G T C A G T C A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:10
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CTGCTTGCCACCCTCC
CTGTTTAC--------
 A G T C A C G T A C T G A G T C A C G T A C G T A C T G A G T C A G T C C T G A A G T C A G T C A G T C C G A T A G T C A G T C
A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T