Information for 12-CCAGATACAC (Motif 18)

G T A C G T A C G T C A A C T G G T C A C G A T C G T A A G T C C G T A A T G C
Reverse Opposite:
A T C G A C G T T C A G A C G T G C T A A C G T T G A C A C G T A C T G A C T G
p-value:1e-9
log p-value:-2.157e+01
Information Content per bp:1.836
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.39%
Number of Background Sequences with motif176.7
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets55.7 +/- 22.7bp
Average Position of motif in Background52.9 +/- 36.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CCAGATACAC
ATGCCAGACN---
 A C G T A C G T A C G T G T A C G T A C G T C A A C T G G T C A C G A T C G T A A G T C C G T A A T G C
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCAGATACAC-
NTTGATACATT
 G T A C G T A C G T C A A C T G G T C A C G A T C G T A A G T C C G T A A T G C A C G T
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CCAGATACAC--
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T A C G T G T A C G T A C G T C A A C T G G T C A C G A T C G T A A G T C C G T A A T G C A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCAGATACAC
CCAGACRSVB
 G T A C G T A C G T C A A C T G G T C A C G A T C G T A A G T C C G T A A T G C
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCAGATACAC
CCAGGAACAG
 G T A C G T A C G T C A A C T G G T C A C G A T C G T A A G T C C G T A A T G C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCAGATACAC
VCAGGTRDRY
 G T A C G T A C G T C A A C T G G T C A C G A T C G T A A G T C C G T A A T G C
T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCAGATACAC
CCAGACAG--
 G T A C G T A C G T C A A C T G G T C A C G A T C G T A A G T C C G T A A T G C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCAGATACAC
--AGATAASR
 G T A C G T A C G T C A A C T G G T C A C G A T C G T A A G T C C G T A A T G C
A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A

GATA3/MA0037.2/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCAGATACAC
--AGATAAGA
 G T A C G T A C G T C A A C T G G T C A C G A T C G T A A G T C C G T A A T G C
A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CCAGATACAC
TCCAGATGTT-
 A C G T G T A C G T A C G T C A A C T G G T C A C G A T C G T A A G T C C G T A A T G C
A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T A C G T