p-value: | 1e-9 |
log p-value: | -2.189e+01 |
Information Content per bp: | 1.822 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 0.84% |
Number of Background Sequences with motif | 8.3 |
Percentage of Background Sequences with motif | 0.02% |
Average Position of motif in Targets | 60.7 +/- 21.6bp |
Average Position of motif in Background | 45.1 +/- 20.5bp |
Strand Bias (log2 ratio + to - strand density) | 0.4 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0062.1_Sox12_1/Jaspar
Match Rank: | 1 |
Score: | 0.69 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --RYAGAACMMTKWC NTTNAGAACAATTA- |
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PB0063.1_Sox13_1/Jaspar
Match Rank: | 2 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -RYAGAACMMTKWC-- TTAAGAACAATAAATT |
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PB0194.1_Zbtb12_2/Jaspar
Match Rank: | 3 |
Score: | 0.66 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----RYAGAACMMTKWC TATCATTAGAACGCT--- |
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PB0072.1_Sox5_1/Jaspar
Match Rank: | 4 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -RYAGAACMMTKWC-- TTTAGAACAATAAAAT |
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PB0070.1_Sox30_1/Jaspar
Match Rank: | 5 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | RYAGAACMMTKWC--- AATGAACAATGGAATT |
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PB0067.1_Sox18_1/Jaspar
Match Rank: | 6 |
Score: | 0.61 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --RYAGAACMMTKWC- NNTNANAACAATTNNA |
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Sox5/MA0087.1/Jaspar
Match Rank: | 7 |
Score: | 0.61 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | RYAGAACMMTKWC ---NAACAAT--- |
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PB0073.1_Sox7_1/Jaspar
Match Rank: | 8 |
Score: | 0.61 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---RYAGAACMMTKWC------ AATAAAGAACAATAGAATTTCA |
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PB0183.1_Sry_2/Jaspar
Match Rank: | 9 |
Score: | 0.61 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --RYAGAACMMTKWC-- TCACGGAACAATAGGTG |
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PB0173.1_Sox21_2/Jaspar
Match Rank: | 10 |
Score: | 0.61 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --RYAGAACMMTKWC-- NNNNNGAACAATTGANN |
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