Information for 9-GCATTAATAT (Motif 14)

C T A G A G T C C T G A A C G T A C G T C G T A G T C A C G A T C G T A A G C T
Reverse Opposite:
C T G A A C G T C G T A A C G T A C G T C G T A C G T A A G C T A C T G A G T C
p-value:1e-10
log p-value:-2.502e+01
Information Content per bp:1.855
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif14.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets28.9 +/- 22.1bp
Average Position of motif in Background46.6 +/- 36.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3b/MA0601.1/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-GCATTAATAT
NTAATTAATAT
 A C G T C T A G A G T C C T G A A C G T A C G T C G T A G T C A C G A T C G T A A G C T
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T

PH0150.1_Pou4f3/Jaspar

Match Rank:2
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----GCATTAATAT--
GACNTCATTAATAANN
 A C G T A C G T A C G T A C G T C T A G A G T C C T G A A C G T A C G T C G T A G T C A C G A T C G T A A G C T A C G T A C G T
C T A G C T G A T G A C G A T C C A G T G T A C C G T A C G A T C G A T C G T A C T G A C G A T C G T A G T C A A G T C C G A T

PH0129.1_Otx1/Jaspar

Match Rank:3
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----GCATTAATAT--
AGAGGGGATTAATTTAT
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C C T G A A C G T A C G T C G T A G T C A C G A T C G T A A G C T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

Arid3a/MA0151.1/Jaspar

Match Rank:4
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GCATTAATAT
--ATTAAA--
 C T A G A G T C C T G A A C G T A C G T C G T A G T C A C G A T C G T A A G C T
A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T

PH0138.1_Pitx2/Jaspar

Match Rank:5
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GCATTAATAT--
TGAAGGGATTAATCATC
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C C T G A A C G T A C G T C G T A G T C A C G A T C G T A A G C T A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

PH0130.1_Otx2/Jaspar

Match Rank:6
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----GCATTAATAT--
TGTAGGGATTAATTGTC
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C C T G A A C G T A C G T C G T A G T C A C G A T C G T A A G C T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

PH0073.1_Hoxc9/Jaspar

Match Rank:7
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----GCATTAATAT-
GGAGGTCATTAATTAT
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C C T G A A C G T A C G T C G T A G T C A C G A T C G T A A G C T A C G T
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:8
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GCATTAATAT
NNTNTCATGAATGT
 A C G T A C G T A C G T A C G T C T A G A G T C C T G A A C G T A C G T C G T A G T C A C G A T C G T A A G C T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

HOXA5/MA0158.1/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCATTAATAT
-CACTAATT-
 C T A G A G T C C T G A A C G T A C G T C G T A G T C A C G A T C G T A A G C T
A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCATTAATAT
YCATTAMC--
 C T A G A G T C C T G A A C G T A C G T C G T A G T C A C G A T C G T A A G C T
A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C A C G T A C G T