Information for 6-GAAGGCAGGGCTG (Motif 7)

A C T G C G T A C G T A A C T G A C T G A G T C C T G A A C T G A C T G A T C G A G T C A C G T A C T G
Reverse Opposite:
G T A C C G T A A C T G A T G C A G T C A G T C A G C T A C T G G T A C G T A C C G A T A C G T A G T C
p-value:1e-12
log p-value:-2.831e+01
Information Content per bp:1.869
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif6.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.0 +/- 26.3bp
Average Position of motif in Background57.9 +/- 17.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL003.1_GC-box/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAAGGCAGGGCTG
AGGGGGCGGGGCTG
 A C G T A C T G C G T A C G T A A C T G A C T G A G T C C T G A A C T G A C T G A T C G A G T C A C G T A C T G
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

SP2/MA0516.1/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GAAGGCAGGGCTG
GGGNGGGGGCGGGGC--
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G A C T G A G T C C T G A A C T G A C T G A T C G A G T C A C G T A C T G
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GAAGGCAGGGCTG
----CNAGGCCT-
 A C T G C G T A C G T A A C T G A C T G A G T C C T G A A C T G A C T G A T C G A G T C A C G T A C T G
A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAAGGCAGGGCTG
GGGGGCGGGGCC-
 A C T G C G T A C G T A A C T G A C T G A G T C C T G A A C T G A C T G A T C G A G T C A C G T A C T G
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAAGGCAGGGCTG-
CAAAGGCGTGGCCAG
 A C G T A C T G C G T A C G T A A C T G A C T G A G T C C T G A A C T G A C T G A T C G A G T C A C G T A C T G A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GAAGGCAGGGCTG-
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T A C T G C G T A C G T A A C T G A C T G A G T C C T G A A C T G A C T G A T C G A G T C A C G T A C T G A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

SP1/MA0079.3/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAAGGCAGGGCTG
GGGGGCGGGGC--
 A C T G C G T A C G T A A C T G A C T G A G T C C T G A A C T G A C T G A T C G A G T C A C G T A C T G
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GAAGGCAGGGCTG-----
---GGNGCGNCTGTTNNN
 A C T G C G T A C G T A A C T G A C T G A G T C C T G A A C T G A C T G A T C G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GAAGGCAGGGCTG
RGKGGGCGGAGC--
 A C G T A C T G C G T A C G T A A C T G A C T G A G T C C T G A A C T G A C T G A T C G A G T C A C G T A C T G
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:10
Score:0.55
Offset:6
Orientation:forward strand
Alignment:GAAGGCAGGGCTG-
------AGGCCTAG
 A C T G C G T A C G T A A C T G A C T G A G T C C T G A A C T G A C T G A T C G A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G