Information for 4-CAGCGCCCTC (Motif 2)

A G T C C T G A A C T G A G T C A C T G G T A C A G T C A G T C A G C T G T A C
Reverse Opposite:
A C T G C T G A T C A G C T A G A C T G G T A C A C T G A G T C A G C T C T A G
p-value:1e-32
log p-value:-7.451e+01
Information Content per bp:1.788
Number of Target Sequences with motif59.0
Percentage of Target Sequences with motif6.87%
Number of Background Sequences with motif417.2
Percentage of Background Sequences with motif0.87%
Average Position of motif in Targets53.0 +/- 17.5bp
Average Position of motif in Background52.6 +/- 34.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CAGCGCCCTC
CAGCC-----
 A G T C C T G A A C T G A G T C A C T G G T A C A G T C A G T C A G C T G T A C
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CAGCGCCCTC
RGTTAGTGCCCY-
 A C G T A C G T A C G T A G T C C T G A A C T G A G T C A C T G G T A C A G T C A G T C A G C T G T A C
C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CAGCGCCCTC-----
GGTCCCGCCCCCTTCTC
 A C G T A C G T A G T C C T G A A C T G A G T C A C T G G T A C A G T C A G T C A G C T G T A C A C G T A C G T A C G T A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CAGCGCCCTC
--GCTCCG--
 A G T C C T G A A C T G A G T C A C T G G T A C A G T C A G T C A G C T G T A C
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CAGCGCCCTC--
NNNGGGGCGCCCCCNN
 A C G T A C G T A C G T A C G T A G T C C T G A A C T G A G T C A C T G G T A C A G T C A G T C A G C T G T A C A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CAGCGCCCTC-------
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A G T C C T G A A C T G A G T C A C T G G T A C A G T C A G T C A G C T G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CAGCGCCCTC
-GGCGCGCT-
 A G T C C T G A A C T G A G T C A C T G G T A C A G T C A G T C A G C T G T A C
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:8
Score:0.60
Offset:-8
Orientation:reverse strand
Alignment:--------CAGCGCCCTC
TCNNTTTACAGCGNNNT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T G A A C T G A G T C A C T G G T A C A G T C A G T C A G C T G T A C
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T A C G T

PH0157.1_Rhox11_1/Jaspar

Match Rank:9
Score:0.60
Offset:-8
Orientation:reverse strand
Alignment:--------CAGCGCCCTC
TCNNTTTACAGCGNNNT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T G A A C T G A G T C A C T G G T A C A G T C A G T C A G C T G T A C
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:10
Score:0.60
Offset:-8
Orientation:reverse strand
Alignment:--------CAGCGCCCTC
TCNCTTTACAGCGNNNT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T G A A C T G A G T C A C T G G T A C A G T C A G T C A G C T G T A C
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T A C G T