p-value: | 1e-5 |
log p-value: | -1.313e+01 |
Information Content per bp: | 1.567 |
Number of Target Sequences with motif | 121.0 |
Percentage of Target Sequences with motif | 14.09% |
Number of Background Sequences with motif | 4379.1 |
Percentage of Background Sequences with motif | 9.18% |
Average Position of motif in Targets | 51.6 +/- 31.3bp |
Average Position of motif in Background | 49.9 +/- 29.6bp |
Strand Bias (log2 ratio + to - strand density) | 0.1 |
Multiplicity (# of sites on avg that occur together) | 1.14 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
CHR(?)/Hela-CellCycle-Expression/Homer
Match Rank: | 1 |
Score: | 0.78 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TTTTAAAAGG CGGTTTCAAA--- |
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LIN54/MA0619.1/Jaspar
Match Rank: | 2 |
Score: | 0.77 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTTTAAAAGG NATTCAAAT-- |
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TATA-Box(TBP)/Promoter/Homer
Match Rank: | 3 |
Score: | 0.69 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTTTAAAAGG GNCTATAAAAGG |
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HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer
Match Rank: | 4 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TTTTAAAAGG TTTTATKRGG |
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HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer
Match Rank: | 5 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TTTTAAAAGG TTTTATTRGN |
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HOXC13/MA0907.1/Jaspar
Match Rank: | 6 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTTTAAAAGG NTTTTACGAGN |
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PH0068.1_Hoxc13/Jaspar
Match Rank: | 7 |
Score: | 0.59 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TTTTAAAAGG--- NAATTTTACGAGNTNN |
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HLTF/MA0109.1/Jaspar
Match Rank: | 8 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TTTTAAAAGG-- --NNATAAGGNN |
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POL012.1_TATA-Box/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TTTTAAAAGG----- GTATAAAAGGCGGGG |
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TBP/MA0108.2/Jaspar
Match Rank: | 10 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TTTTAAAAGG----- GTATAAAAGGCGGGG |
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