p-value: | 1e-8 |
log p-value: | -1.870e+01 |
Information Content per bp: | 1.924 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.60% |
Number of Background Sequences with motif | 2.4 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 56.4 +/- 27.6bp |
Average Position of motif in Background | 59.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0167.1_Sox13_2/Jaspar
Match Rank: | 1 |
Score: | 0.64 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCTAATGGATGGG----- -GTATTGGGTGGGTAATT |
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VENTX/MA0724.1/Jaspar
Match Rank: | 2 |
Score: | 0.64 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GCTAATGGATGGG -CTAATCGNT--- |
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Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer
Match Rank: | 3 |
Score: | 0.63 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCTAATGGATGGG -CTAATKGV---- |
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PH0109.1_Nkx1-1/Jaspar
Match Rank: | 4 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GCTAATGGATGGG- TGCGCTAATTAGTGGGA |
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Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 5 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCTAATGGATGGG GTTAATGGCC--- |
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Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer
Match Rank: | 6 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GCTAATGGATGGG -NTAATKGTTT-- |
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BARX1/MA0875.1/Jaspar
Match Rank: | 7 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GCTAATGGATGGG -NTAATTGN---- |
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Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer
Match Rank: | 8 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCTAATGGATGGG GKTAATGR----- |
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Barhl1/MA0877.1/Jaspar
Match Rank: | 9 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCTAATGGATGGG GCTAATTGCT--- |
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HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
Match Rank: | 10 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GCTAATGGATGGG -ATGATKGATGRC |
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