Information for 1-KCTGTGTTTGCTTTYC (Motif 4)

A C G T G A T C C G A T A T C G A C G T A C T G A C G T A C G T A C G T A C T G A T G C A C G T A C G T A C G T A G C T A G T C
Reverse Opposite:
A C T G C T A G C G T A G T C A C G T A A T C G G T A C C G T A G T C A C G T A A G T C C G T A A T G C C G T A C T A G G T A C
p-value:1e-12
log p-value:-2.897e+01
Information Content per bp:1.814
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.7 +/- 28.2bp
Average Position of motif in Background23.3 +/- 17.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXP1/MA0481.1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:KCTGTGTTTGCTTTYC
-CTTTGTTTACTTTTN
 A C G T G A T C C G A T A T C G A C G T A C T G A C G T A C G T A C G T A C T G A T G C A C G T A C G T A C G T A G C T A G T C
A C G T A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:KCTGTGTTTGCTTTYC
----TGTTTACTTT--
 A C G T G A T C C G A T A T C G A C G T A C T G A C G T A C G T A C G T A C T G A T G C A C G T A C G T A C G T A G C T A G T C
A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:3
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:KCTGTGTTTGCTTTYC
----TGTTTACTTT--
 A C G T G A T C C G A T A T C G A C G T A C T G A C G T A C G T A C G T A C T G A T G C A C G T A C G T A C G T A G C T A G T C
A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:4
Score:0.69
Offset:4
Orientation:forward strand
Alignment:KCTGTGTTTGCTTTYC
----TRTTTACTTW--
 A C G T G A T C C G A T A T C G A C G T A C T G A C G T A C G T A C G T A C T G A T G C A C G T A C G T A C G T A G C T A G T C
A C G T A C G T A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:5
Score:0.65
Offset:4
Orientation:forward strand
Alignment:KCTGTGTTTGCTTTYC
----TGTTTATTT---
 A C G T G A T C C G A T A T C G A C G T A C T G A C G T A C G T A C G T A C T G A T G C A C G T A C G T A C G T A G C T A G T C
A C G T A C G T A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:KCTGTGTTTGCTTTYC
TCCATGTTTACTTTG-
 A C G T G A T C C G A T A T C G A C G T A C T G A C G T A C G T A C G T A C T G A T G C A C G T A C G T A C G T A G C T A G T C
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:7
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:KCTGTGTTTGCTTTYC
--TNTGTTTACTT---
 A C G T G A T C C G A T A T C G A C G T A C T G A C G T A C G T A C G T A C T G A T G C A C G T A C G T A C G T A G C T A G T C
A C G T A C G T G A C T A G C T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C A T G A C T A C G T A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:KCTGTGTTTGCTTTYC
--TTTGTTTACTTA--
 A C G T G A T C C G A T A T C G A C G T A C T G A C G T A C G T A C G T A C T G A T G C A C G T A C G T A C G T A G C T A G T C
A C G T A C G T C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:KCTGTGTTTGCTTTYC---
--NSTGTTTRCWCAGBNNN
 A C G T G A T C C G A T A T C G A C G T A C T G A C G T A C G T A C G T A C T G A T G C A C G T A C G T A C G T A G C T A G T C A C G T A C G T A C G T
A C G T A C G T G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

PB0016.1_Foxj1_1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--KCTGTGTTTGCTTTYC
NNNNTTTGTTTACNNT--
 A C G T A C G T A C G T G A T C C G A T A T C G A C G T A C T G A C G T A C G T A C G T A C T G A T G C A C G T A C G T A C G T A G C T A G T C
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T A C G T A C G T