Information for 9-TGGTTTTAGTGTGCTT (Motif 17)

A C G T A C T G A T C G A C G T A C G T A C G T A C G T C G T A A C T G A G C T C T A G A C G T A T C G G T A C A G C T A C G T
Reverse Opposite:
C G T A C T G A A C T G A T G C C G T A A G T C C T G A A G T C G C A T C G T A C G T A C G T A C G T A A T G C G T A C C G T A
p-value:1e-9
log p-value:-2.143e+01
Information Content per bp:1.909
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.7 +/- 18.9bp
Average Position of motif in Background39.3 +/- 8.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TGGTTTTAGTGTGCTT--
--NNNNTTGTGTGCTTNN
 A C G T A C T G A T C G A C G T A C G T A C G T A C G T C G T A A C T G A G C T C T A G A C G T A T C G G T A C A G C T A C G T A C G T A C G T
A C G T A C G T A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGGTTTTAGTGTGCTT
TGGTTTCAGT------
 A C G T A C T G A T C G A C G T A C G T A C G T A C G T C G T A A C T G A G C T C T A G A C G T A T C G G T A C A G C T A C G T
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:3
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TGGTTTTAGTGTGCTT
NTNAATTTTATTGNATT-
 A C G T A C G T A C G T A C T G A T C G A C G T A C G T A C G T A C G T C G T A A C T G A G C T C T A G A C G T A T C G G T A C A G C T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:4
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TGGTTTTAGTGTGCTT--
NAGTTTCABTHTGACTNW
 A C G T A C T G A T C G A C G T A C G T A C G T A C G T C G T A A C T G A G C T C T A G A C G T A T C G G T A C A G C T A C G T A C G T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

PB0123.1_Foxl1_2/Jaspar

Match Rank:5
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----TGGTTTTAGTGTGCTT
NNTTTTGTTTTGATNT----
 A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C G T A C G T A C G T A C G T C G T A A C T G A G C T C T A G A C G T A T C G G T A C A G C T A C G T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----TGGTTTTAGTGTGCTT
NNTGTGGTTT----------
 A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C G T A C G T A C G T A C G T C G T A A C T G A G C T C T A G A C G T A T C G G T A C A G C T A C G T
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:7
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:TGGTTTTAGTGTGCTT
--TTTTTATTGG----
 A C G T A C T G A T C G A C G T A C G T A C G T A C G T C G T A A C T G A G C T C T A G A C G T A T C G G T A C A G C T A C G T
A C G T A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T A C G T A C G T

IRF9/MA0653.1/Jaspar

Match Rank:8
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:TGGTTTTAGTGTGCTT
-AGTTTCGGTTTCGTT
 A C G T A C T G A T C G A C G T A C G T A C G T A C G T C G T A A C T G A G C T C T A G A C G T A T C G G T A C A G C T A C G T
A C G T C T G A A T C G C G A T C G A T A C G T G A T C C T A G A T C G C A G T C G A T A C G T G A T C C T A G C G A T C G A T

HOXB13/MA0901.1/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:TGGTTTTAGTGTGCTT
--NTTTTATTGG----
 A C G T A C T G A T C G A C G T A C G T A C G T A C G T C G T A A C T G A G C T C T A G A C G T A T C G G T A C A G C T A C G T
A C G T A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-TGGTTTTAGTGTGCTT
NNANTTTTATTGGNNN-
 A C G T A C G T A C T G A T C G A C G T A C G T A C G T A C G T C G T A A C T G A G C T C T A G A C G T A T C G G T A C A G C T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G A C G T