Information for 1-ATGAAAAAAATTC (Motif 1)

T C G A A C G T A C T G C G T A C G T A C T G A C G T A G T C A C G T A C G T A A C G T C G A T A G T C
Reverse Opposite:
A C T G C G T A G T C A A C G T A C G T A C G T A C G T A G C T A C G T A C G T A G T C C G T A A G C T
p-value:1e-17
log p-value:-3.949e+01
Information Content per bp:1.867
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.6 +/- 19.3bp
Average Position of motif in Background71.6 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---ATGAAAAAAATTC
TACTGGAAAAAAAA--
 A C G T A C G T A C G T T C G A A C G T A C T G C G T A C G T A C T G A C G T A G T C A C G T A C G T A A C G T C G A T A G T C
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATGAAAAAAATTC--
NNTNANAACAATTNNA
 A C G T T C G A A C G T A C T G C G T A C G T A C T G A C G T A G T C A C G T A C G T A A C G T C G A T A G T C A C G T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0062.1_Sox12_1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ATGAAAAAAATTC
NTTNAGAACAATTA
 A C G T T C G A A C G T A C T G C G T A C G T A C T G A C G T A G T C A C G T A C G T A A C G T C G A T A G T C
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0182.1_Srf_2/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATGAAAAAAATTC---
GTTAAAAAAAAAAATTA
 A C G T T C G A A C G T A C T G C G T A C G T A C T G A C G T A G T C A C G T A C G T A A C G T C G A T A G T C A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0145.1_Mafb_2/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ATGAAAAAAATTC
CAATTGCAAAAATAT-
 A C G T A C G T A C G T T C G A A C G T A C T G C G T A C G T A C T G A C G T A G T C A C G T A C G T A A C G T C G A T A G T C
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T

SRY/MA0084.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ATGAAAAAAATTC
--GTAAACAAT--
 T C G A A C G T A C T G C G T A C G T A C T G A C G T A G T C A C G T A C G T A A C G T C G A T A G T C
A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATGAAAAAAATTC
AATGGAAAAT----
 A C G T T C G A A C G T A C T G C G T A C G T A C T G A C G T A G T C A C G T A C G T A A C G T C G A T A G T C
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T

Foxk1/MA0852.1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ATGAAAAAAATTC-
AAAATGTAAACAAACAG
 A C G T A C G T A C G T T C G A A C G T A C T G C G T A C G T A C T G A C G T A G T C A C G T A C G T A A C G T C G A T A G T C A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ATGAAAAAAATTC-
AAAATGTAAACAAACAG
 A C G T A C G T A C G T T C G A A C G T A C T G C G T A C G T A C T G A C G T A G T C A C G T A C G T A A C G T C G A T A G T C A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0148.1_Mtf1_2/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----ATGAAAAAAATTC
AAATAAGAAAAAAC---
 A C G T A C G T A C G T A C G T T C G A A C G T A C T G C G T A C G T A C T G A C G T A G T C A C G T A C G T A A C G T C G A T A G T C
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C A C G T A C G T A C G T