Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-68 | -1.575e+02 | 0.0000 | 208.0 | 27.33% | 2761.9 | 6.70% | motif file (matrix) |
svg |
2 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-64 | -1.494e+02 | 0.0000 | 95.0 | 12.48% | 469.9 | 1.14% | motif file (matrix) |
svg |
3 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-64 | -1.486e+02 | 0.0000 | 227.0 | 29.83% | 3461.1 | 8.40% | motif file (matrix) |
svg |
4 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-64 | -1.474e+02 | 0.0000 | 200.0 | 26.28% | 2709.0 | 6.57% | motif file (matrix) |
svg |
5 |
| GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer | 1e-63 | -1.457e+02 | 0.0000 | 73.0 | 9.59% | 228.8 | 0.56% | motif file (matrix) |
svg |
6 |
| GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-62 | -1.431e+02 | 0.0000 | 94.0 | 12.35% | 490.4 | 1.19% | motif file (matrix) |
svg |
7 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-60 | -1.403e+02 | 0.0000 | 269.0 | 35.35% | 4990.5 | 12.11% | motif file (matrix) |
svg |
8 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-53 | -1.232e+02 | 0.0000 | 176.0 | 23.13% | 2468.0 | 5.99% | motif file (matrix) |
svg |
9 |
| PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer | 1e-50 | -1.162e+02 | 0.0000 | 90.0 | 11.83% | 605.2 | 1.47% | motif file (matrix) |
svg |
10 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-49 | -1.135e+02 | 0.0000 | 157.0 | 20.63% | 2121.0 | 5.15% | motif file (matrix) |
svg |
11 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-41 | -9.665e+01 | 0.0000 | 88.0 | 11.56% | 737.7 | 1.79% | motif file (matrix) |
svg |
12 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-35 | -8.066e+01 | 0.0000 | 138.0 | 18.13% | 2213.8 | 5.37% | motif file (matrix) |
svg |
13 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-31 | -7.316e+01 | 0.0000 | 155.0 | 20.37% | 2920.5 | 7.09% | motif file (matrix) |
svg |
14 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-30 | -6.948e+01 | 0.0000 | 136.0 | 17.87% | 2410.2 | 5.85% | motif file (matrix) |
svg |
15 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-29 | -6.723e+01 | 0.0000 | 126.0 | 16.56% | 2157.2 | 5.23% | motif file (matrix) |
svg |
16 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-22 | -5.085e+01 | 0.0000 | 280.0 | 36.79% | 8757.0 | 21.25% | motif file (matrix) |
svg |
17 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-21 | -4.984e+01 | 0.0000 | 121.0 | 15.90% | 2463.9 | 5.98% | motif file (matrix) |
svg |
18 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-19 | -4.398e+01 | 0.0000 | 74.0 | 9.72% | 1156.9 | 2.81% | motif file (matrix) |
svg |
19 |
| FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-17 | -3.921e+01 | 0.0000 | 29.0 | 3.81% | 186.5 | 0.45% | motif file (matrix) |
svg |
20 |
| NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-15 | -3.563e+01 | 0.0000 | 22.0 | 2.89% | 107.6 | 0.26% | motif file (matrix) |
svg |
21 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-13 | -3.171e+01 | 0.0000 | 107.0 | 14.06% | 2609.8 | 6.33% | motif file (matrix) |
svg |
22 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-13 | -3.081e+01 | 0.0000 | 164.0 | 21.55% | 4904.4 | 11.90% | motif file (matrix) |
svg |
23 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-13 | -3.079e+01 | 0.0000 | 77.0 | 10.12% | 1590.2 | 3.86% | motif file (matrix) |
svg |
24 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-12 | -2.964e+01 | 0.0000 | 135.0 | 17.74% | 3782.7 | 9.18% | motif file (matrix) |
svg |
25 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-11 | -2.736e+01 | 0.0000 | 48.0 | 6.31% | 782.4 | 1.90% | motif file (matrix) |
svg |
26 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-9 | -2.295e+01 | 0.0000 | 79.0 | 10.38% | 1947.3 | 4.73% | motif file (matrix) |
svg |
27 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-9 | -2.102e+01 | 0.0000 | 64.0 | 8.41% | 1486.3 | 3.61% | motif file (matrix) |
svg |
28 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-8 | -1.967e+01 | 0.0000 | 76.0 | 9.99% | 1982.7 | 4.81% | motif file (matrix) |
svg |
29 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-7 | -1.729e+01 | 0.0000 | 63.0 | 8.28% | 1605.1 | 3.89% | motif file (matrix) |
svg |
30 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-6 | -1.584e+01 | 0.0000 | 29.0 | 3.81% | 502.0 | 1.22% | motif file (matrix) |
svg |
31 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-6 | -1.492e+01 | 0.0000 | 53.0 | 6.96% | 1342.3 | 3.26% | motif file (matrix) |
svg |
32 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-6 | -1.410e+01 | 0.0000 | 63.0 | 8.28% | 1762.2 | 4.28% | motif file (matrix) |
svg |
33 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-5 | -1.364e+01 | 0.0000 | 72.0 | 9.46% | 2147.3 | 5.21% | motif file (matrix) |
svg |
34 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-5 | -1.331e+01 | 0.0000 | 67.0 | 8.80% | 1965.6 | 4.77% | motif file (matrix) |
svg |
35 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-5 | -1.239e+01 | 0.0000 | 99.0 | 13.01% | 3375.8 | 8.19% | motif file (matrix) |
svg |
36 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-5 | -1.214e+01 | 0.0001 | 46.0 | 6.04% | 1210.5 | 2.94% | motif file (matrix) |
svg |
37 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-5 | -1.203e+01 | 0.0001 | 193.0 | 25.36% | 7770.0 | 18.85% | motif file (matrix) |
svg |
38 |
| Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer | 1e-4 | -1.139e+01 | 0.0001 | 45.0 | 5.91% | 1209.3 | 2.93% | motif file (matrix) |
svg |
39 |
| STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer | 1e-4 | -1.117e+01 | 0.0001 | 25.0 | 3.29% | 507.9 | 1.23% | motif file (matrix) |
svg |
40 |
| STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer | 1e-4 | -1.018e+01 | 0.0003 | 26.0 | 3.42% | 573.7 | 1.39% | motif file (matrix) |
svg |
41 |
| EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer | 1e-4 | -9.786e+00 | 0.0005 | 52.0 | 6.83% | 1575.9 | 3.82% | motif file (matrix) |
svg |
42 |
| HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer | 1e-4 | -9.230e+00 | 0.0008 | 45.0 | 5.91% | 1327.3 | 3.22% | motif file (matrix) |
svg |
43 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-3 | -9.123e+00 | 0.0009 | 51.0 | 6.70% | 1577.7 | 3.83% | motif file (matrix) |
svg |
44 |
| Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-3 | -9.033e+00 | 0.0010 | 24.0 | 3.15% | 546.6 | 1.33% | motif file (matrix) |
svg |
45 |
| Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer | 1e-3 | -8.665e+00 | 0.0014 | 31.0 | 4.07% | 814.8 | 1.98% | motif file (matrix) |
svg |
46 |
| STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer | 1e-3 | -8.353e+00 | 0.0019 | 60.0 | 7.88% | 2011.3 | 4.88% | motif file (matrix) |
svg |
47 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-3 | -7.942e+00 | 0.0028 | 56.0 | 7.36% | 1872.5 | 4.54% | motif file (matrix) |
svg |
48 |
| ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer | 1e-3 | -7.908e+00 | 0.0028 | 10.0 | 1.31% | 141.2 | 0.34% | motif file (matrix) |
svg |
49 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-3 | -7.891e+00 | 0.0028 | 50.0 | 6.57% | 1621.7 | 3.94% | motif file (matrix) |
svg |
50 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-3 | -7.379e+00 | 0.0045 | 54.0 | 7.10% | 1831.5 | 4.44% | motif file (matrix) |
svg |
51 |
| Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer | 1e-3 | -7.240e+00 | 0.0051 | 15.0 | 1.97% | 305.6 | 0.74% | motif file (matrix) |
svg |
52 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-3 | -7.223e+00 | 0.0051 | 70.0 | 9.20% | 2550.1 | 6.19% | motif file (matrix) |
svg |
53 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.011e+00 | 0.0062 | 28.0 | 3.68% | 783.8 | 1.90% | motif file (matrix) |
svg |
54 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -6.888e+00 | 0.0069 | 22.0 | 2.89% | 562.4 | 1.36% | motif file (matrix) |
svg |
55 |
| Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer | 1e-2 | -6.798e+00 | 0.0074 | 121.0 | 15.90% | 4982.9 | 12.09% | motif file (matrix) |
svg |
56 |
| GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -6.796e+00 | 0.0074 | 8.0 | 1.05% | 109.3 | 0.27% | motif file (matrix) |
svg |
57 |
| ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-2 | -6.666e+00 | 0.0081 | 44.0 | 5.78% | 1459.8 | 3.54% | motif file (matrix) |
svg |
58 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-2 | -6.524e+00 | 0.0092 | 55.0 | 7.23% | 1948.8 | 4.73% | motif file (matrix) |
svg |
59 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-2 | -6.192e+00 | 0.0126 | 46.0 | 6.04% | 1583.2 | 3.84% | motif file (matrix) |
svg |
60 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-2 | -6.170e+00 | 0.0127 | 30.0 | 3.94% | 911.2 | 2.21% | motif file (matrix) |
svg |
61 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-2 | -6.053e+00 | 0.0140 | 83.0 | 10.91% | 3276.0 | 7.95% | motif file (matrix) |
svg |
62 |
| HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer | 1e-2 | -5.764e+00 | 0.0184 | 14.0 | 1.84% | 321.2 | 0.78% | motif file (matrix) |
svg |
63 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.627e+00 | 0.0208 | 26.0 | 3.42% | 783.5 | 1.90% | motif file (matrix) |
svg |
64 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-2 | -5.608e+00 | 0.0209 | 46.0 | 6.04% | 1634.3 | 3.97% | motif file (matrix) |
svg |
65 |
| Sp1(Zf)/Promoter/Homer | 1e-2 | -5.576e+00 | 0.0212 | 7.0 | 0.92% | 105.1 | 0.25% | motif file (matrix) |
svg |
66 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-2 | -5.521e+00 | 0.0221 | 40.0 | 5.26% | 1379.2 | 3.35% | motif file (matrix) |
svg |
67 |
| Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.509e+00 | 0.0221 | 69.0 | 9.07% | 2688.6 | 6.52% | motif file (matrix) |
svg |
68 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.414e+00 | 0.0238 | 32.0 | 4.20% | 1045.1 | 2.54% | motif file (matrix) |
svg |
69 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.231e+00 | 0.0282 | 13.0 | 1.71% | 306.4 | 0.74% | motif file (matrix) |
svg |
70 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.101e+00 | 0.0317 | 10.0 | 1.31% | 208.0 | 0.50% | motif file (matrix) |
svg |
71 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-2 | -5.074e+00 | 0.0321 | 69.0 | 9.07% | 2741.8 | 6.65% | motif file (matrix) |
svg |
72 |
| NFY(CCAAT)/Promoter/Homer | 1e-2 | -4.926e+00 | 0.0367 | 38.0 | 4.99% | 1343.2 | 3.26% | motif file (matrix) |
svg |
73 |
| GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer | 1e-2 | -4.881e+00 | 0.0378 | 9.0 | 1.18% | 182.3 | 0.44% | motif file (matrix) |
svg |
74 |
| ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer | 1e-2 | -4.830e+00 | 0.0393 | 13.0 | 1.71% | 322.3 | 0.78% | motif file (matrix) |
svg |
75 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-2 | -4.781e+00 | 0.0407 | 209.0 | 27.46% | 9751.7 | 23.66% | motif file (matrix) |
svg |
76 |
| MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer | 1e-2 | -4.715e+00 | 0.0429 | 21.0 | 2.76% | 637.3 | 1.55% | motif file (matrix) |
svg |
77 |
| PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer | 1e-2 | -4.645e+00 | 0.0454 | 16.0 | 2.10% | 443.9 | 1.08% | motif file (matrix) |
svg |
78 |
| Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer | 1e-2 | -4.611e+00 | 0.0464 | 40.0 | 5.26% | 1461.6 | 3.55% | motif file (matrix) |
svg |