Information for 19-TCTCATTAGATAG (Motif 28)

A C G T A G T C A C G T A T G C C G T A A C G T A C G T C G T A A C T G C G T A A C G T C G T A C T A G
Reverse Opposite:
A G T C A C G T G T C A A C G T A G T C A C G T T G C A C G T A A C G T A T C G C G T A A C T G C G T A
p-value:1e-5
log p-value:-1.378e+01
Information Content per bp:1.932
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.3 +/- 18.2bp
Average Position of motif in Background28.7 +/- 3.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F2/MA0793.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCTCATTAGATAG
AGCTCATTAT----
 A C G T A C G T A G T C A C G T A T G C C G T A A C G T A C G T C G T A A C T G C G T A A C G T C G T A C T A G
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T A C G T A C G T A C G T

PH0058.1_Hoxb3/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TCTCATTAGATAG-
TGAGCTAATTAGTTGGA
 A C G T A C G T A C G T A C G T A G T C A C G T A T G C C G T A A C G T A C G T C G T A A C T G C G T A A C G T C G T A C T A G A C G T
C G A T T C A G T G C A T A C G A T G C G A C T G T C A C G T A C G A T A C G T C T G A T A C G A G C T C A G T T C A G C T A G C G T A

PDX1/MA0132.2/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCTCATTAGATAG
-GTAATTAG----
 A C G T A G T C A C G T A T G C C G T A A C G T A C G T C G T A A C T G C G T A A C G T C G T A C T A G
A C G T T A C G G A C T T G C A G T C A A C G T A C G T C G T A T C A G A C G T A C G T A C G T A C G T

GSX1/MA0892.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCTCATTAGATAG
CCTAATTAAA---
 A C G T A G T C A C G T A T G C C G T A A C G T A C G T C G T A A C T G C G T A A C G T C G T A C T A G
G T A C A T G C G A C T G T C A T C G A G C A T G A C T C G T A T C G A G C T A A C G T A C G T A C G T

NOTO/MA0710.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCTCATTAGATAG
GCTAATTAGC---
 A C G T A G T C A C G T A T G C C G T A A C G T A C G T C G T A A C T G C G T A A C G T C G T A C T A G
T A C G G A T C G C A T G T C A C G T A A C G T C A G T C T G A T C A G A T G C A C G T A C G T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TCTCATTAGATAG
NNNACCTCATTATCNTN
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A T G C C G T A A C G T A C G T C G T A A C T G C G T A A C G T C G T A C T A G
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

HOXB3/MA0903.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCTCATTAGATAG
ACTAATTAGC---
 A C G T A G T C A C G T A T G C C G T A A C G T A C G T C G T A A C T G C G T A A C G T C G T A C T A G
C T G A T A G C G A C T T G C A T C G A A G C T G A C T G C T A T C A G T G A C A C G T A C G T A C G T

GSX2/MA0893.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCTCATTAGATAG
ACTAATTAAA---
 A C G T A G T C A C G T A T G C C G T A A C G T A C G T C G T A A C T G C G T A A C G T C G T A C T A G
G T C A A T G C G A C T G T C A C G T A G C A T G C A T G C T A T C G A G T C A A C G T A C G T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TCTCATTAGATAG
GCAACCTCATTATNNNN
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A T G C C G T A A C G T A C G T C G T A A C T G C G T A A C G T C G T A C T A G
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

VAX2/MA0723.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TCTCATTAGATAG
-NTAATTAG----
 A C G T A G T C A C G T A T G C C G T A A C G T A C G T C G T A A C T G C G T A A C G T C G T A C T A G
A C G T T C A G G A C T G T C A G C T A C G A T C A G T C T G A T C A G A C G T A C G T A C G T A C G T