Information for 13-CAGTATTATAGTA (Motif 22)

A G T C C G T A A C T G A C G T C T G A C G A T A C G T C G T A A G C T C G T A A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C C G A T C T G A C G A T C G T A C G T A A G C T C G T A A G T C A C G T A C T G
p-value:1e-8
log p-value:-1.917e+01
Information Content per bp:1.929
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.0 +/- 18.2bp
Average Position of motif in Background33.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0079.1_Sry_1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CAGTATTATAGTA---
TATAATTATAATATTC
 A G T C C G T A A C T G A C G T C T G A C G A T A C G T C G T A A G C T C G T A A C T G A C G T C G T A A C G T A C G T A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

PB0174.1_Sox30_2/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CAGTATTATAGTA---
NCGTATTATAATCNTA
 A G T C C G T A A C T G A C G T C T G A C G A T A C G T C G T A A G C T C G T A A C T G A C G T C G T A A C G T A C G T A C G T
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A

PB0069.1_Sox21_1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAGTATTATAGTA---
TTTAATTATAATTAAG
 A G T C C G T A A C T G A C G T C T G A C G A T A C G T C G T A A G C T C G T A A C T G A C G T C G T A A C G T A C G T A C G T
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G

ZNF410/MA0752.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CAGTATTATAGTA----
GANTATTATGGGATGGA
 A G T C C G T A A C T G A C G T C T G A C G A T A C G T C G T A A G C T C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T
C A T G T C G A C A T G G A C T C T G A A G C T A C G T C T G A C A G T A T C G A C T G C A T G G T C A C G A T C T A G A C T G T G C A

PB0064.1_Sox14_1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CAGTATTATAGTA---
NNTAATTATAATTNNN
 A G T C C G T A A C T G A C G T C T G A C G A T A C G T C G T A A G C T C G T A A C T G A C G T C G T A A C G T A C G T A C G T
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

Arid5a/MA0602.1/Jaspar

Match Rank:6
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CAGTATTATAGTA
NNTNNCAATATTAG----
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T C T G A C G A T A C G T C G T A A G C T C G T A A C T G A C G T C G T A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CAGTATTATAGTA
NNTNNCAATATTAG----
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T C T G A C G A T A C G T C G T A A G C T C G T A A C T G A C G T C G T A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CAGTATTATAGTA--
CCGTATTATAAACAA
 A G T C C G T A A C T G A C G T C T G A C G A T A C G T C G T A A G C T C G T A A C T G A C G T C G T A A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

Sox1/MA0870.1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CAGTATTATAGTA
AACAATGNTATTGTT
 A C G T A C G T A G T C C G T A A C T G A C G T C T G A C G A T A C G T C G T A A G C T C G T A A C T G A C G T C G T A
T C G A C T G A A G T C C T G A G T C A A C G T T A C G A G C T G C A T C G T A A C G T C A G T A C T G C G A T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CAGTATTATAGTA
NGGGATTA-----
 A G T C C G T A A C T G A C G T C T G A C G A T A C G T C G T A A G C T C G T A A C T G A C G T C G T A
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T A C G T A C G T