Information for 12-GAATGTAATTTGC (Motif 21)

A C T G C G T A C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C T G A G T C
Reverse Opposite:
A C T G T A G C G T C A C G T A C G T A A C G T A C G T C G T A A G T C C G T A A C G T A C G T A G T C
p-value:1e-8
log p-value:-1.917e+01
Information Content per bp:1.928
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.8 +/- 19.1bp
Average Position of motif in Background19.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0169.1_Sox15_2/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GAATGTAATTTGC
TTGAATGAAATTCGA
 A C G T A C G T A C T G C G T A C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C T G A G T C
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

PH0052.1_Hoxa5/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GAATGTAATTTGC----
-ACGGTAATTAGCTCAG
 A C T G C G T A C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T T C G A T G A C C T A G A C T G G A C T G T C A G T C A A C G T A C G T C T G A T A C G G A T C G C A T G T A C C G T A C T A G

PHOX2A/MA0713.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GAATGTAATTTGC
TAATTTAATTA--
 A C T G C G T A C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C T G A G T C
G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A A C G T A C G T

PH0049.1_Hoxa2/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GAATGTAATTTGC----
-AAGGTAATTAGCTCAT
 A C T G C G T A C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T C T G A T G C A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A T A C G G A T C G A C T G T A C C G T A C G A T

PH0053.1_Hoxa6/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GAATGTAATTTGC----
-AAGGTAATTACCTAAT
 A C T G C G T A C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T T C G A G T C A C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A T G A C G A T C G A C T G T C A C G T A C A G T

DLX6/MA0882.1/Jaspar

Match Rank:6
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GAATGTAATTTGC
----NTAATTGN-
 A C T G C G T A C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C T G A G T C
A C G T A C G T A C G T A C G T C A T G C G A T T C G A C G T A C A G T C A G T C T A G A T C G A C G T

Phox2b/MA0681.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GAATGTAATTTGC
TAATTTAATTA--
 A C T G C G T A C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C T G A G T C
G C A T C T G A T C G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GAATGTAATTTGC
NTGGAATGTG------
 A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C T G A G T C
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Dlx4/MA0881.1/Jaspar

Match Rank:9
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GAATGTAATTTGC
----NTAATTGN-
 A C T G C G T A C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C T G A G T C
A C G T A C G T A C G T A C G T C A T G C G A T T C G A C G T A C A G T C A G T C T A G A T C G A C G T

Dlx3/MA0880.1/Jaspar

Match Rank:10
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GAATGTAATTTGC
----NTAATTGN-
 A C T G C G T A C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C T G A G T C
A C G T A C G T A C G T A C G T C A T G C G A T T C G A C G T A C A G T C A G T C T A G A T C G A C G T