Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-46 | -1.079e+02 | 0.0000 | 53.0 | 16.61% | 456.1 | 0.96% | motif file (matrix) |
svg |
2 |
| GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer | 1e-42 | -9.870e+01 | 0.0000 | 40.0 | 12.54% | 218.6 | 0.46% | motif file (matrix) |
svg |
3 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-41 | -9.486e+01 | 0.0000 | 48.0 | 15.05% | 438.9 | 0.93% | motif file (matrix) |
svg |
4 |
| PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer | 1e-37 | -8.584e+01 | 0.0000 | 51.0 | 15.99% | 637.3 | 1.35% | motif file (matrix) |
svg |
5 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-26 | -6.052e+01 | 0.0000 | 108.0 | 33.86% | 5268.7 | 11.14% | motif file (matrix) |
svg |
6 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-20 | -4.813e+01 | 0.0000 | 91.0 | 28.53% | 4547.6 | 9.62% | motif file (matrix) |
svg |
7 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-19 | -4.549e+01 | 0.0000 | 79.0 | 24.76% | 3667.0 | 7.76% | motif file (matrix) |
svg |
8 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-18 | -4.197e+01 | 0.0000 | 76.0 | 23.82% | 3632.6 | 7.68% | motif file (matrix) |
svg |
9 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-15 | -3.582e+01 | 0.0000 | 61.0 | 19.12% | 2754.8 | 5.83% | motif file (matrix) |
svg |
10 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-14 | -3.400e+01 | 0.0000 | 61.0 | 19.12% | 2867.3 | 6.06% | motif file (matrix) |
svg |
11 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-14 | -3.269e+01 | 0.0000 | 119.0 | 37.30% | 8856.4 | 18.73% | motif file (matrix) |
svg |
12 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-11 | -2.549e+01 | 0.0000 | 60.0 | 18.81% | 3403.3 | 7.20% | motif file (matrix) |
svg |
13 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-9 | -2.124e+01 | 0.0000 | 29.0 | 9.09% | 1089.8 | 2.30% | motif file (matrix) |
svg |
14 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-8 | -1.854e+01 | 0.0000 | 47.0 | 14.73% | 2789.5 | 5.90% | motif file (matrix) |
svg |
15 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-7 | -1.823e+01 | 0.0000 | 56.0 | 17.55% | 3703.8 | 7.83% | motif file (matrix) |
svg |
16 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-7 | -1.736e+01 | 0.0000 | 41.0 | 12.85% | 2334.7 | 4.94% | motif file (matrix) |
svg |
17 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-6 | -1.607e+01 | 0.0000 | 51.0 | 15.99% | 3432.7 | 7.26% | motif file (matrix) |
svg |
18 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-6 | -1.602e+01 | 0.0000 | 36.0 | 11.29% | 1992.8 | 4.21% | motif file (matrix) |
svg |
19 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-6 | -1.472e+01 | 0.0000 | 43.0 | 13.48% | 2777.0 | 5.87% | motif file (matrix) |
svg |
20 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-6 | -1.442e+01 | 0.0000 | 52.0 | 16.30% | 3731.2 | 7.89% | motif file (matrix) |
svg |
21 |
| FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-5 | -1.248e+01 | 0.0001 | 10.0 | 3.13% | 223.1 | 0.47% | motif file (matrix) |
svg |
22 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-5 | -1.244e+01 | 0.0001 | 44.0 | 13.79% | 3138.9 | 6.64% | motif file (matrix) |
svg |
23 |
| GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-5 | -1.227e+01 | 0.0001 | 9.0 | 2.82% | 179.1 | 0.38% | motif file (matrix) |
svg |
24 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-4 | -1.141e+01 | 0.0002 | 40.0 | 12.54% | 2849.4 | 6.03% | motif file (matrix) |
svg |
25 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-4 | -1.086e+01 | 0.0003 | 26.0 | 8.15% | 1526.4 | 3.23% | motif file (matrix) |
svg |
26 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-4 | -1.083e+01 | 0.0003 | 29.0 | 9.09% | 1812.6 | 3.83% | motif file (matrix) |
svg |
27 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-4 | -1.074e+01 | 0.0003 | 31.0 | 9.72% | 2015.0 | 4.26% | motif file (matrix) |
svg |
28 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-4 | -1.038e+01 | 0.0004 | 26.0 | 8.15% | 1571.6 | 3.32% | motif file (matrix) |
svg |
29 |
| NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-4 | -9.839e+00 | 0.0007 | 7.0 | 2.19% | 139.9 | 0.30% | motif file (matrix) |
svg |
30 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-4 | -9.534e+00 | 0.0009 | 12.0 | 3.76% | 451.7 | 0.96% | motif file (matrix) |
svg |
31 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-4 | -9.516e+00 | 0.0009 | 54.0 | 16.93% | 4685.8 | 9.91% | motif file (matrix) |
svg |
32 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-3 | -8.778e+00 | 0.0018 | 15.0 | 4.70% | 725.4 | 1.53% | motif file (matrix) |
svg |
33 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-3 | -7.706e+00 | 0.0050 | 34.0 | 10.66% | 2719.3 | 5.75% | motif file (matrix) |
svg |
34 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-3 | -6.931e+00 | 0.0105 | 25.0 | 7.84% | 1860.2 | 3.93% | motif file (matrix) |
svg |
35 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-2 | -6.770e+00 | 0.0119 | 56.0 | 17.55% | 5494.7 | 11.62% | motif file (matrix) |
svg |
36 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -6.053e+00 | 0.0238 | 8.0 | 2.51% | 338.9 | 0.72% | motif file (matrix) |
svg |
37 |
| HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer | 1e-2 | -5.967e+00 | 0.0252 | 24.0 | 7.52% | 1890.2 | 4.00% | motif file (matrix) |
svg |
38 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -5.674e+00 | 0.0329 | 10.0 | 3.13% | 526.6 | 1.11% | motif file (matrix) |
svg |
39 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-2 | -5.572e+00 | 0.0355 | 12.0 | 3.76% | 714.2 | 1.51% | motif file (matrix) |
svg |
40 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-2 | -5.489e+00 | 0.0376 | 17.0 | 5.33% | 1214.2 | 2.57% | motif file (matrix) |
svg |
41 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.393e+00 | 0.0404 | 24.0 | 7.52% | 1980.1 | 4.19% | motif file (matrix) |
svg |
42 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -5.376e+00 | 0.0404 | 40.0 | 12.54% | 3858.1 | 8.16% | motif file (matrix) |
svg |
43 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.153e+00 | 0.0489 | 23.0 | 7.21% | 1908.5 | 4.04% | motif file (matrix) |
svg |
44 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-2 | -5.053e+00 | 0.0529 | 71.0 | 22.26% | 7910.8 | 16.73% | motif file (matrix) |
svg |