Information for 6-CTGACCCTCT (Motif 15)

A G T C A C G T A C T G C T G A A G T C G T A C A G T C A C G T A G T C C G A T
Reverse Opposite:
C G T A A C T G C G T A C T A G A C T G A C T G A G C T T G A C C G T A A C T G
p-value:1e-9
log p-value:-2.177e+01
Information Content per bp:1.869
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif3.13%
Number of Background Sequences with motif81.1
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets46.2 +/- 18.6bp
Average Position of motif in Background50.3 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CTGACCCTCT
-TGACCT---
 A G T C A C G T A C T G C T G A A G T C G T A C A G T C A C G T A G T C C G A T
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CTGACCCTCT
-TGACCYCT-
 A G T C A C G T A C T G C T G A A G T C G T A C A G T C A C G T A G T C C G A T
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T

RORA/MA0071.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTGACCCTCT-
-TGACCTTGAT
 A G T C A C G T A C T G C T G A A G T C G T A C A G T C A C G T A G T C C G A T A C G T
A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTGACCCTCT
NNACTTACCTN--
 A C G T A C G T A C G T A G T C A C G T A C T G C T G A A G T C G T A C A G T C A C G T A G T C C G A T
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTGACCCTCT-
NCTGTCAATCAN
 A C G T A G T C A C G T A C T G C T G A A G T C G T A C A G T C A C G T A G T C C G A T A C G T
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

Esrrg/MA0643.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTGACCCTCT
ATGACCTTGA
 A G T C A C G T A C T G C T G A A G T C G T A C A G T C A C G T A G T C C G A T
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTGACCCTCT
NTGACCTTGA
 A G T C A C G T A C T G C T G A A G T C G T A C A G T C A C G T A G T C C G A T
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTGACCCTCT
GTGACCTT--
 A G T C A C G T A C T G C T G A A G T C G T A C A G T C A C G T A G T C C G A T
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CTGACCCTCT---
NNNNTGACCCGGCGCG
 A C G T A C G T A C G T A G T C A C G T A C T G C T G A A G T C G T A C A G T C A C G T A G T C C G A T A C G T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

Crx/MA0467.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTGACCCTCT-
CTAATCCTCTT
 A G T C A C G T A C T G C T G A A G T C G T A C A G T C A C G T A G T C C G A T A C G T
G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T