p-value: | 1e-9 |
log p-value: | -2.239e+01 |
Information Content per bp: | 1.664 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 2.19% |
Number of Background Sequences with motif | 21.9 |
Percentage of Background Sequences with motif | 0.05% |
Average Position of motif in Targets | 45.1 +/- 19.5bp |
Average Position of motif in Background | 51.3 +/- 26.7bp |
Strand Bias (log2 ratio + to - strand density) | 1.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
Match Rank: | 1 |
Score: | 0.54 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GAWGAATATTGTACHG -ATGAATATTC----- |
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HSF1/MA0486.2/Jaspar
Match Rank: | 2 |
Score: | 0.52 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GAWGAATATTGTACHG ---GAACGTTCTAGAA |
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HSF2/MA0770.1/Jaspar
Match Rank: | 3 |
Score: | 0.51 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GAWGAATATTGTACHG ---GAANGTTCTAGAA |
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PB0063.1_Sox13_1/Jaspar
Match Rank: | 4 |
Score: | 0.51 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GAWGAATATTGTACHG-- --AANTTATTGTTCTNNA |
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HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer
Match Rank: | 5 |
Score: | 0.51 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GAWGAATATTGTACHG -TAGAANVTTCTAGAA |
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HSF4/MA0771.1/Jaspar
Match Rank: | 6 |
Score: | 0.49 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GAWGAATATTGTACHG ---GAANNTTCTAGAA |
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PB0183.1_Sry_2/Jaspar
Match Rank: | 7 |
Score: | 0.49 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GAWGAATATTGTACHG--- --CNNNTATTGTTCNNNNN |
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HNF4G/MA0484.1/Jaspar
Match Rank: | 8 |
Score: | 0.49 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GAWGAATATTGTACHG- --TGGACTTTGNNCTCN |
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PB0072.1_Sox5_1/Jaspar
Match Rank: | 9 |
Score: | 0.49 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GAWGAATATTGTACHG-- --NNTTTATTGTTCTNNN |
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SOX8/MA0868.1/Jaspar
Match Rank: | 10 |
Score: | 0.48 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GAWGAATATTGTACHG---- ----AACAATGTGCAGTGTT |
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