Information for 6-TGCCAGCACTHCAGAG (Motif 7)

C G A T A C T G A T G C A G T C C G T A C T A G T G A C G T C A A G T C G C A T G C A T A G T C C G T A A C T G T C G A A C T G
Reverse Opposite:
G T A C A C G T G T A C C G A T A C T G C G T A C G T A T C A G A C G T A C T G A G T C A C G T A C T G A T C G G T A C C G T A
p-value:1e-15
log p-value:-3.507e+01
Information Content per bp:1.705
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.9 +/- 16.7bp
Average Position of motif in Background55.5 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGCCAGCACTHCAGAG
CGTGCCAAG---------
 A C G T A C G T C G A T A C T G A T G C A G T C C G T A C T A G T G A C G T C A A G T C G C A T G C A T A G T C C G T A A C T G T C G A A C T G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGCCAGCACTHCAGAG
TTGCCAAG---------
 A C G T C G A T A C T G A T G C A G T C C G T A C T A G T G A C G T C A A G T C G C A T G C A T A G T C C G T A A C T G T C G A A C T G
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGCCAGCACTHCAGAG
TGCCAA----------
 C G A T A C T G A T G C A G T C C G T A C T A G T G A C G T C A A G T C G C A T G C A T A G T C C G T A A C T G T C G A A C T G
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGCCAGCACTHCAGAG
ATGCCAGACN-------
 A C G T C G A T A C T G A T G C A G T C C G T A C T A G T G A C G T C A A G T C G C A T G C A T A G T C C G T A A C T G T C G A A C T G
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGCCAGCACTHCAGAG
CTGCCCGCA--------
 A C G T C G A T A C T G A T G C A G T C C G T A C T A G T G A C G T C A A G T C G C A T G C A T A G T C C G T A A C T G T C G A A C T G
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGCCAGCACTHCAGAG
ATGCCAACC--------
 A C G T C G A T A C T G A T G C A G T C C G T A C T A G T G A C G T C A A G T C G C A T G C A T A G T C C G T A A C T G T C G A A C T G
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGCCAGCACTHCAGAG
SCTGTCARCACC------
 A C G T A C G T C G A T A C T G A T G C A G T C C G T A C T A G T G A C G T C A A G T C G C A T G C A T A G T C C G T A A C T G T C G A A C T G
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TGCCAGCACTHCAGAG
GGTGCCAAGT--------
 A C G T A C G T C G A T A C T G A T G C A G T C C G T A C T A G T G A C G T C A A G T C G C A T G C A T A G T C C G T A A C T G T C G A A C T G
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TGCCAGCACTHCAGAG
NCTANGTCAGCAAATTT---
 A C G T A C G T A C G T A C G T C G A T A C T G A T G C A G T C C G T A C T A G T G A C G T C A A G T C G C A T G C A T A G T C C G T A A C T G T C G A A C T G
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGCCAGCACTHCAGAG
NGTCAGCANTTT----
 C G A T A C T G A T G C A G T C C G T A C T A G T G A C G T C A A G T C G C A T G C A T A G T C C G T A A C T G T C G A A C T G
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T A C G T A C G T