Information for 4-GCHAATATTTAYCTTG (Motif 5)

C T A G G A T C G C A T T G C A C G T A A G C T C T G A A C G T G C A T A C G T C G T A G A C T A G T C G A C T C A G T T C A G
Reverse Opposite:
A G T C G T C A C T G A T C A G C T G A G C A T G T C A C G T A T G C A G A C T C T G A A C G T A C G T C G A T C A T G G A T C
p-value:1e-20
log p-value:-4.680e+01
Information Content per bp:1.644
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.26%
Number of Background Sequences with motif30.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets52.3 +/- 25.3bp
Average Position of motif in Background49.7 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXC1/MA0032.2/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GCHAATATTTAYCTTG
----ATATTTACATA-
 C T A G G A T C G C A T T G C A C G T A A G C T C T G A A C G T G C A T A C G T C G T A G A C T A G T C G A C T C A G T T C A G
A C G T A C G T A C G T A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GCHAATATTTAYCTTG
----ATATTTACATA-
 C T A G G A T C G C A T T G C A C G T A A G C T C T G A A C G T G C A T A C G T C G T A G A C T A G T C G A C T C A G T T C A G
A C G T A C G T A C G T A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCHAATATTTAYCTTG
-CTAATATTGCTAAA-
 C T A G G A T C G C A T T G C A C G T A A G C T C T G A A C G T G C A T A C G T C G T A G A C T A G T C G A C T C A G T T C A G
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCHAATATTTAYCTTG
-CTAATATTGCTAAA-
 C T A G G A T C G C A T T G C A C G T A A G C T C T G A A C G T G C A T A C G T C G T A G A C T A G T C G A C T C A G T T C A G
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:5
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GCHAATATTTAYCTTG
-----TRTTTACTTW-
 C T A G G A T C G C A T T G C A C G T A A G C T C T G A A C G T G C A T A C G T C G T A G A C T A G T C G A C T C A G T T C A G
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCHAATATTTAYCTTG-
--BSNTGTTTACWYWGN
 C T A G G A T C G C A T T G C A C G T A A G C T C T G A A C G T G C A T A C G T C G T A G A C T A G T C G A C T C A G T T C A G A C G T
A C G T A C G T A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:7
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GCHAATATTTAYCTTG
-----TGTTTACTTT-
 C T A G G A T C G C A T T G C A C G T A A G C T C T G A A C G T G C A T A C G T C G T A G A C T A G T C G A C T C A G T T C A G
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GCHAATATTTAYCTTG
---TTTGTTTACTTA-
 C T A G G A T C G C A T T G C A C G T A A G C T C T G A A C G T G C A T A C G T C G T A G A C T A G T C G A C T C A G T T C A G
A C G T A C G T A C G T C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:9
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GCHAATATTTAYCTTG-
-----TGTTTACTTAGG
 C T A G G A T C G C A T T G C A C G T A A G C T C T G A A C G T G C A T A C G T C G T A G A C T A G T C G A C T C A G T T C A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

FOXA1/MA0148.3/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCHAATATTTAYCTTG
-TCCATGTTTACTTTG
 C T A G G A T C G C A T T G C A C G T A A G C T C T G A A C G T G C A T A C G T C G T A G A C T A G T C G A C T C A G T T C A G
A C G T G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G