Information for 3-CTGTGTTATTGCACCT (Motif 4)

G A T C A C G T A C T G A C G T A C T G A G C T C G A T C G T A A C G T C G A T A C T G A G T C G T C A G T A C A G T C A C G T
Reverse Opposite:
C G T A C T A G C A T G A C G T A C T G A G T C C G T A C G T A A C G T C G T A C T G A G T A C G T C A A G T C C G T A C A T G
p-value:1e-21
log p-value:-5.018e+01
Information Content per bp:1.807
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.7 +/- 24.4bp
Average Position of motif in Background63.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:1
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CTGTGTTATTGCACCT
----GGGATTGCATNN
 G A T C A C G T A C T G A C G T A C T G A G C T C G A T C G T A A C G T C G A T A C T G A G T C G T C A G T A C A G T C A C G T
A C G T A C G T A C G T A C G T T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

PH0075.1_Hoxd10/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTGTGTTATTGCACCT
NTNAATTTTATTGNATT-
 A C G T A C G T G A T C A C G T A C T G A C G T A C T G A G C T C G A T C G T A A C G T C G A T A C T G A G T C G T C A G T A C A G T C A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CTGTGTTATTGCACCT
---TTTTATGGCTN--
 G A T C A C G T A C T G A C G T A C T G A G C T C G A T C G T A A C G T C G A T A C T G A G T C G T C A G T A C A G T C A C G T
A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T A C G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTGTGTTATTGCACCT
--NTTTTATTACN---
 G A T C A C G T A C T G A C G T A C T G A G C T C G A T C G T A A C G T C G A T A C T G A G T C G T C A G T A C A G T C A C G T
A C G T A C G T C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C A C G T A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CTGTGTTATTGCACCT
---TTTTATTGC----
 G A T C A C G T A C T G A C G T A C T G A G C T C G A T C G T A A C G T C G A T A C T G A G T C G T C A G T A C A G T C A C G T
A C G T A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T A C G T A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTGTGTTATTGCACCT
--TTTTTATTGC----
 G A T C A C G T A C T G A C G T A C T G A G C T C G A T C G T A A C G T C G A T A C T G A G T C G T C A G T A C A G T C A C G T
A C G T A C G T C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C A C G T A C G T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTGTGTTATTGCACCT
--NTTTTATGAC----
 G A T C A C G T A C T G A C G T A C T G A G C T C G A T C G T A A C G T C G A T A C T G A G T C G T C A G T A C A G T C A C G T
A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTGTGTTATTGCACCT
--NTTTTATTGG----
 G A T C A C G T A C T G A C G T A C T G A G C T C G A T C G T A A C G T C G A T A C T G A G T C G T C A G T A C A G T C A C G T
A C G T A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTGTGTTATTGCACCT
-TGATTTATGGCC---
 G A T C A C G T A C T G A C G T A C T G A G C T C G A T C G T A A C G T C G A T A C T G A G T C G T C A G T A C A G T C A C G T
A C G T C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C A C G T A C G T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTGTGTTATTGCACCT
---TTTAATTGCN---
 G A T C A C G T A C T G A C G T A C T G A G C T C G A T C G T A A C G T C G A T A C T G A G T C G T C A G T A C A G T C A C G T
A C G T A C G T A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C A C G T A C G T A C G T