Information for 24-CAAGACAAACTTAACA (Motif 35)

A T G C C G T A C T G A C A T G C T G A A G T C C G T A T C G A T C G A T A G C G A C T C G A T C T G A C T G A T A G C G C T A
Reverse Opposite:
C G A T A C T G G A C T A G C T G C T A C T G A A C T G A C G T A G C T A C G T A C T G A G C T G T A C A G C T A C G T A T C G
p-value:1e-7
log p-value:-1.725e+01
Information Content per bp:1.658
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.73%
Number of Background Sequences with motif108.6
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets50.5 +/- 22.2bp
Average Position of motif in Background55.4 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CAAGACAAACTTAACA--
--TGCCAAAATAAACANN
 A T G C C G T A C T G A C A T G C T G A A G T C C G T A T C G A T C G A T A G C G A C T C G A T C T G A C T G A T A G C G C T A A C G T A C G T
A C G T A C G T C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

PB0037.1_Isgf3g_1/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAAGACAAACTTAACA
CAAAATCGAAACTAA---
 A C G T A C G T A T G C C G T A C T G A C A T G C T G A A G T C C G T A T C G A T C G A T A G C G A C T C G A T C T G A C T G A T A G C G C T A
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A A C G T A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CAAGACAAACTTAACA
GGAAANTGAAACTNA---
 A C G T A C G T A T G C C G T A C T G A C A T G C T G A A G T C C G T A T C G A T C G A T A G C G A C T C G A T C T G A C T G A T A G C G C T A
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A A C G T A C G T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CAAGACAAACTTAACA
-AAGATAAGATAACA-
 A T G C C G T A C T G A C A T G C T G A A G T C C G T A T C G A T C G A T A G C G A C T C G A T C T G A C T G A T A G C G C T A
A C G T C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CAAGACAAACTTAACA
AAACAGACAAAGGAAT--
 A C G T A C G T A T G C C G T A C T G A C A T G C T G A A G T C C G T A T C G A T C G A T A G C G A C T C G A T C T G A C T G A T A G C G C T A
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CAAGACAAACTTAACA
-AAAACAAAGG-----
 A T G C C G T A C T G A C A T G C T G A A G T C C G T A T C G A T C G A T A G C G A C T C G A T C T G A C T G A T A G C G C T A
A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CAAGACAAACTTAACA
CAAAAGTAAACAAAG--
 A C G T A T G C C G T A C T G A C A T G C T G A A G T C C G T A T C G A T C G A T A G C G A C T C G A T C T G A C T G A T A G C G C T A
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CAAGACAAACTTAACA
GAAAMTGAAACT-----
 A C G T A T G C C G T A C T G A C A T G C T G A A G T C C G T A T C G A T C G A T A G C G A C T C G A T C T G A C T G A T A G C G C T A
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T A C G T A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CAAGACAAACTTAACA
GAAAGTGAAAGT-----
 A C G T A T G C C G T A C T G A C A T G C T G A A G T C C G T A T C G A T C G A T A G C G A C T C G A T C T G A C T G A T A G C G C T A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CAAGACAAACTTAACA
--AGATAAGA------
 A T G C C G T A C T G A C A T G C T G A A G T C C G T A T C G A T C G A T A G C G A C T C G A T C T G A C T G A T A G C G C T A
A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T