Information for 14-AGAACAGCGA (Motif 33)

C T G A A T C G T G C A C G T A G T A C G T C A T A C G G T A C T C A G T G C A
Reverse Opposite:
A C G T A G T C C A T G A T G C A C G T C A T G G C A T A C G T T A G C A G C T
p-value:1e-8
log p-value:-1.917e+01
Information Content per bp:1.680
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.39%
Number of Background Sequences with motif195.2
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets59.1 +/- 19.4bp
Average Position of motif in Background52.1 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AGAACAGCGA
CCAGGAACAG---
 A C G T A C G T A C G T C T G A A T C G T G C A C G T A G T A C G T C A T A C G G T A C T C A G T G C A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AGAACAGCGA---
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T C T G A A T C G T G C A C G T A G T A C G T C A T A C G G T A C T C A G T G C A A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AGAACAGCGA---
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T C T G A A T C G T G C A C G T A G T A C G T C A T A C G G T A C T C A G T G C A A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGAACAGCGA
--CACAGN--
 C T G A A T C G T G C A C G T A G T A C G T C A T A C G G T A C T C A G T G C A
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGAACAGCGA
TGGAACAGMA-
 A C G T C T G A A T C G T G C A C G T A G T A C G T C A T A C G G T A C T C A G T G C A
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AGAACAGCGA---
TCNCTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T C T G A A T C G T G C A C G T A G T A C G T C A T A C G G T A C T C A G T G C A A C G T A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

PB0061.1_Sox11_1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGAACAGCGA----
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T C T G A A T C G T G C A C G T A G T A C G T C A T A C G G T A C T C A G T G C A A C G T A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGAACAGCGA----
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T C T G A A T C G T G C A C G T A G T A C G T C A T A C G G T A C T C A G T G C A A C G T A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0120.1_Foxj1_2/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----AGAACAGCGA
ATGTCACAACAACAC
 A C G T A C G T A C G T A C G T A C G T C T G A A T C G T G C A C G T A G T A C G T C A T A C G G T A C T C A G T G C A
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGAACAGCGA
GGAACAAAGR
 C T G A A T C G T G C A C G T A G T A C G T C A T A C G G T A C T C A G T G C A
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G