Information for 18-GTTTAACSATTAT (Motif 29)

A C T G A C G T A C G T A C G T T C G A C G T A T A G C A T C G C G T A C G A T A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A C G T A A C G T A T C G A C T G A C G T A C G T C G T A C G T A C G T A A G T C
p-value:1e-8
log p-value:-2.008e+01
Information Content per bp:1.862
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.8 +/- 29.1bp
Average Position of motif in Background77.4 +/- 3.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GTTTAACSATTAT
GGTTAAACATTAA
 A C T G A C G T A C G T A C G T T C G A C G T A T A G C A T C G C G T A C G A T A C G T C G T A A C G T
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A

HOXD12/MA0873.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTTTAACSATTAT
NTTTTACGACT--
 A C T G A C G T A C G T A C G T T C G A C G T A T A G C A T C G C G T A C G A T A C G T C G T A A C G T
C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T A C G T A C G T

MYBL2/MA0777.1/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GTTTAACSATTAT
GACNGTTTAACGGTT--
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T T C G A C G T A T A G C A T C G C G T A C G A T A C G T C G T A A C G T
C T A G C T G A T A G C T A G C A C T G C G A T A C G T G C A T C T G A G T C A G A T C A T C G A C T G G A C T G A C T A C G T A C G T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTTTAACSATTAT
-GTTAATNATTAA
 A C T G A C G T A C G T A C G T T C G A C G T A T A G C A T C G C G T A C G A T A C G T C G T A A C G T
A C G T C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A

PH0047.1_Hoxa11/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTTTAACSATTAT-
NNGTTTTACGACTTTA
 A C G T A C G T A C T G A C G T A C G T A C G T T C G A C G T A T A G C A T C G C G T A C G A T A C G T C G T A A C G T A C G T
G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A

HOXC11/MA0651.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTTTAACSATTAT
NTTTTACGACC--
 A C T G A C G T A C G T A C G T T C G A C G T A T A G C A T C G C G T A C G A T A C G T C G T A A C G T
C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C A C G T A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTTTAACSATTAT
NTTTTACGAC---
 A C T G A C G T A C G T A C G T T C G A C G T A T A G C A T C G C G T A C G A T A C G T C G T A A C G T
C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C A C G T A C G T A C G T

HOXC12/MA0906.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTTTAACSATTAT
NTTTTACGACC--
 A C T G A C G T A C G T A C G T T C G A C G T A T A G C A T C G C G T A C G A T A C G T C G T A A C G T
C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C A C G T A C G T

Hoxa11/MA0911.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GTTTAACSATTAT
ANTTTTACGACC--
 A C G T A C T G A C G T A C G T A C G T T C G A C G T A T A G C A T C G C G T A C G A T A C G T C G T A A C G T
G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C A C G T A C G T

HOXC10/MA0905.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTTTAACSATTAT
NTTTTACGAC---
 A C T G A C G T A C G T A C G T T C G A C G T A T A G C A T C G C G T A C G A T A C G T C G T A A C G T
C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T A C G T A C G T