Information for 19-GGAAKAGTGTGSMGGR (Motif 25)

A C T G C T A G C G T A C G T A A C T G C G T A A C T G A C G T A C T G A C G T T A C G T A C G G T A C A C T G C A T G C T A G
Reverse Opposite:
G A T C G T A C G T A C C A T G A T G C A G T C G T C A G T A C G T C A G T A C C G A T T G A C C G A T A C G T A G T C A G T C
p-value:1e-9
log p-value:-2.209e+01
Information Content per bp:1.705
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.2 +/- 29.8bp
Average Position of motif in Background29.2 +/- 10.8bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.80
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:1
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGAAKAGTGTGSMGGR
TWGHWACAWTGTWDC---
 A C G T A C G T A C T G C T A G C G T A C G T A A C T G C G T A A C T G A C G T A C T G A C G T T A C G T A C G G T A C A C T G C A T G C T A G
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GGAAKAGTGTGSMGGR
--CTCATTGTC-----
 A C T G C T A G C G T A C G T A A C T G C G T A A C T G A C G T A C T G A C G T T A C G T A C G G T A C A C T G C A T G C T A G
A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGAAKAGTGTGSMGGR
YDGHTACAWTGTADC---
 A C G T A C G T A C T G C T A G C G T A C G T A A C T G C G T A A C T G A C G T A C T G A C G T T A C G T A C G G T A C A C T G C A T G C T A G
G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGAAKAGTGTGSMGGR
NNNNTTGTGTGCTTNN
 A C T G C T A G C G T A C G T A A C T G C G T A A C T G A C G T A C T G A C G T T A C G T A C G G T A C A C T G C A T G C T A G
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGAAKAGTGTGSMGGR
TGGAAAA----------
 A C G T A C T G C T A G C G T A C G T A A C T G C G T A A C T G A C G T A C T G A C G T T A C G T A C G G T A C A C T G C A T G C T A G
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGAAKAGTGTGSMGGR
TGGAACAGMA-------
 A C G T A C T G C T A G C G T A C G T A A C T G C G T A A C T G A C G T A C T G A C G T T A C G T A C G G T A C A C T G C A T G C T A G
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGAAKAGTGTGSMGGR
NNGCGTGTGTGCNGCN
 A C T G C T A G C G T A C G T A A C T G C G T A A C T G A C G T A C T G A C G T T A C G T A C G G T A C A C T G C A T G C T A G
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

SPIB/MA0081.1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GGAAKAGTGTGSMGGR
AGAGGAA------------
 A C G T A C G T A C G T A C T G C T A G C G T A C G T A A C T G C G T A A C T G A C G T A C T G A C G T T A C G T A C G G T A C A C T G C A T G C T A G
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GGAAKAGTGTGSMGGR
NNTGGAAANN---------
 A C G T A C G T A C G T A C T G C T A G C G T A C G T A A C T G C G T A A C T G A C G T A C T G A C G T T A C G T A C G G T A C A C T G C A T G C T A G
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SOX8/MA0868.1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GGAAKAGTGTGSMGGR--
--AACAATGTGCAGTGTT
 A C T G C T A G C G T A C G T A A C T G C G T A A C T G A C G T A C T G A C G T T A C G T A C G G T A C A C T G C A T G C T A G A C G T A C G T
A C G T A C G T C G T A C G T A G T A C C T G A C G T A A C G T C T A G C G A T A C T G A G T C C G T A C A T G A C G T A C T G C G A T A G C T