Information for 18-TTTATTDCTTGGCYWC (Motif 23)

A C G T A C G T A C G T C G T A A C G T A G C T C T A G T G A C A C G T A C G T A C T G A T C G A G T C G A T C C G T A A T G C
Reverse Opposite:
A T C G C G A T C T A G C T A G T A G C G T A C C G T A C G T A A C T G G A T C C T G A C G T A A C G T C G T A C G T A C G T A
p-value:1e-10
log p-value:-2.348e+01
Information Content per bp:1.744
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif13.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets52.1 +/- 23.9bp
Average Position of motif in Background41.3 +/- 14.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX2/MA0465.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTTATTDCTTGGCYWC
TTTTATGGCTN------
 A C G T A C G T A C G T A C G T C G T A A C G T A G C T C T A G T G A C A C G T A C G T A C T G A T C G A G T C G A T C C G T A A T G C
A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTTATTDCTTGGCYWC
NTNTTGTTGTTTGTN---
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T C T A G T G A C A C G T A C G T A C T G A T C G A G T C G A T C C G T A A T G C
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T A C G T A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTTATTDCTTGGCYWC
TTTTATTGC--------
 A C G T A C G T A C G T A C G T C G T A A C G T A G C T C T A G T G A C A C G T A C G T A C T G A T C G A G T C G A T C C G T A A T G C
C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTTATTDCTTGGCYWC
NTTTTATTACN-------
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T C T A G T G A C A C G T A C G T A C T G A T C G A G T C G A T C C G T A A T G C
C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTTATTDCTTGGCYWC
NTTTTATGAC--------
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T C T A G T G A C A C G T A C G T A C T G A T C G A G T C G A T C C G T A A T G C
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:6
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TTTATTDCTTGGCYWC
NGANTTTTATGGCTCN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T C T A G T G A C A C G T A C G T A C T G A T C G A G T C G A T C C G T A A T G C
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:7
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TTTATTDCTTGGCYWC
NNAATTTTATTGGNTN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T C T A G T G A C A C G T A C G T A C T G A T C G A G T C G A T C C G T A A T G C
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:8
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TTTATTDCTTGGCYWC
NNANTTTTATTGGNNN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T C T A G T G A C A C G T A C G T A C T G A T C G A G T C G A T C C G T A A T G C
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G A C G T A C G T A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTTATTDCTTGGCYWC
TTTTTATTGG--------
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T C T A G T G A C A C G T A C G T A C T G A T C G A G T C G A T C C G T A A T G C
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTTATTDCTTGGCYWC
NTTTTATTGG--------
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T C T A G T G A C A C G T A C G T A C T G A T C G A G T C G A T C C G T A A T G C
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T