Information for 10-GTTTATGAGC (Motif 20)

T C A G A C G T C G A T A G C T C G T A A C G T A C T G C G T A A C T G G T A C
Reverse Opposite:
A C T G G T A C A C G T A G T C C G T A A C G T C T G A G C T A C G T A A G T C
p-value:1e-10
log p-value:-2.466e+01
Information Content per bp:1.852
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.12%
Number of Background Sequences with motif102.8
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets58.5 +/- 21.0bp
Average Position of motif in Background53.1 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0068.1_Hoxc13/Jaspar

Match Rank:1
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---GTTTATGAGC---
NAATTTTACGAGNTNN
 A C G T A C G T A C G T T C A G A C G T C G A T A G C T C G T A A C G T A C T G C G T A A C T G G T A C A C G T A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

PH0048.1_Hoxa13/Jaspar

Match Rank:2
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---GTTTATGAGC---
ANATTTTACGAGNNNN
 A C G T A C G T A C G T T C A G A C G T C G A T A G C T C G T A A C G T A C T G C G T A A C T G G T A C A C G T A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

HOXC13/MA0907.1/Jaspar

Match Rank:3
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-GTTTATGAGC
NTTTTACGAGN
 A C G T T C A G A C G T C G A T A G C T C G T A A C G T A C T G C G T A A C T G G T A C
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:4
Score:0.75
Offset:0
Orientation:forward strand
Alignment:GTTTATGAGC
TTTTATKRGG
 T C A G A C G T C G A T A G C T C G T A A C G T A C T G C G T A A C T G G T A C
C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GTTTATGAGC
TTTTATTRGN
 T C A G A C G T C G A T A G C T C G T A A C G T A C T G C G T A A C T G G T A C
C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:6
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--GTTTATGAGC
DGWTTTATGRCN
 A C G T A C G T T C A G A C G T C G A T A G C T C G T A A C G T A C T G C G T A A C T G G T A C
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

HOXC10/MA0905.1/Jaspar

Match Rank:7
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GTTTATGAGC
NTTTTACGAC-
 A C G T T C A G A C G T C G A T A G C T C G T A A C G T A C T G C G T A A C T G G T A C
C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T

Hoxa11/MA0911.1/Jaspar

Match Rank:8
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GTTTATGAGC
ANTTTTACGACC
 A C G T A C G T T C A G A C G T C G A T A G C T C G T A A C G T A C T G C G T A A C T G G T A C
G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C

HOXD13/MA0909.1/Jaspar

Match Rank:9
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GTTTATGAGC
NTTTTATTGG-
 A C G T T C A G A C G T C G A T A G C T C G T A A C G T A C T G C G T A A C T G G T A C
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:10
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GTTTATGAGC----
GACGATAATGAGCTTGC
 A C G T A C G T A C G T T C A G A C G T C G A T A G C T C G T A A C G T A C T G C G T A A C T G G T A C A C G T A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C