Information for 12-AAGATAGGCACTT (Motif 13)

C G T A C G T A C T A G C G T A G A C T C G T A A C T G C T A G A G T C C G T A G T A C G C A T A C G T
Reverse Opposite:
G T C A C G T A A C T G C G A T A C T G A G T C A G T C A C G T C G T A A C G T A G T C A C G T A C G T
p-value:1e-12
log p-value:-2.956e+01
Information Content per bp:1.817
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets74.6 +/- 19.3bp
Average Position of motif in Background41.8 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AAGATAGGCACTT
CCAAAAATAG------
 A C G T A C G T A C G T C G T A C G T A C T A G C G T A G A C T C G T A A C T G C T A G A G T C C G T A G T A C G C A T A C G T
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:2
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------AAGATAGGCACTT
ATGCTAAAAATAGAA----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T A G C G T A G A C T C G T A A C T G C T A G A G T C C G T A G T A C G C A T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T A C G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AAGATAGGCACTT
DCYAAAAATAGM-----
 A C G T A C G T A C G T A C G T C G T A C G T A C T A G C G T A G A C T C G T A A C T G C T A G A G T C C G T A G T A C G C A T A C G T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:4
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AAGATAGGCACTT
KCCAAAAATAGC-----
 A C G T A C G T A C G T A C G T C G T A C G T A C T A G C G T A G A C T C G T A A C T G C T A G A G T C C G T A G T A C G C A T A C G T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AAGATAGGCACTT
ANAGATAAGAA---
 A C G T C G T A C G T A C T A G C G T A G A C T C G T A A C T G C T A G A G T C C G T A G T A C G C A T A C G T
C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AAGATAGGCACTT
-AGATAAGA----
 C G T A C G T A C T A G C G T A G A C T C G T A A C T G C T A G A G T C C G T A G T A C G C A T A C G T
A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T A C G T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:7
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----AAGATAGGCACTT
AAGATAAGATAACA----
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T A G C G T A G A C T C G T A A C T G C T A G A G T C C G T A G T A C G C A T A C G T
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A A C G T A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:8
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----AAGATAGGCACTT
GCTAAAAATAGC-----
 A C G T A C G T A C G T A C G T C G T A C G T A C T A G C G T A G A C T C G T A A C T G C T A G A G T C C G T A G T A C G C A T A C G T
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T

GATA2/MA0036.2/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AAGATAGGCACTT
NCAGATAAGAANNN
 A C G T C G T A C G T A C T A G C G T A G A C T C G T A A C T G C T A G A G T C C G T A G T A C G C A T A C G T
C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:AAGATAGGCACTT--
-----AAGCACTTAA
 C G T A C G T A C T A G C G T A G A C T C G T A A C T G C T A G A G T C C G T A G T A C G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A