Information for 8-ATTACAAGGTACA (Motif 11)

C G T A A G C T A C G T C G T A A G T C C G T A C T G A C T A G A C T G C G A T C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T C G T A A G T C A G T C A G C T A C G T A C T G A C G T C G T A C T G A A C G T
p-value:1e-13
log p-value:-3.149e+01
Information Content per bp:1.892
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.2 +/- 15.1bp
Average Position of motif in Background39.9 +/- 9.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.64
Offset:4
Orientation:forward strand
Alignment:ATTACAAGGTACA-
----CCAGGAACAG
 C G T A A G C T A C G T C G T A A G T C C G T A C T G A C T A G A C T G C G A T C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ATTACAAGGTACA
CANAGNNCAAAGTCCA
 A C G T A C G T A C G T C G T A A G C T A C G T C G T A A G T C C G T A C T G A C T A G A C T G C G A T C G T A A G T C C G T A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:ATTACAAGGTACA
---ACAAAG----
 C G T A A G C T A C G T C G T A A G T C C G T A C T G A C T A G A C T G C G A T C G T A A G T C C G T A
A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ATTACAAGGTACA
AGAGTCCAAAGTCCA
 A C G T A C G T C G T A A G C T A C G T C G T A A G T C C G T A C T G A C T A G A C T G C G A T C G T A A G T C C G T A
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----ATTACAAGGTACA--
AGTAAACAAAAAAGAACANN
 A C G T A C G T A C G T A C G T A C G T C G T A A G C T A C G T C G T A A G T C C G T A C T G A C T A G A C T G C G A T C G T A A G T C C G T A A C G T A C G T
C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:ATTACAAGGTACA----
-GGCAAAAGTCCAATAA
 C G T A A G C T A C G T C G T A A G T C C G T A C T G A C T A G A C T G C G A T C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:ATTACAAGGTACA-
----CAAAGGTCAG
 C G T A A G C T A C G T C G T A A G T C C G T A C T G A C T A G A C T G C G A T C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

PB0061.1_Sox11_1/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---ATTACAAGGTACA-
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T C G T A A G C T A C G T C G T A A G T C C G T A C T G A C T A G A C T G C G A T C G T A A G T C C G T A A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:ATTACAAGGTACA--
---ACAAAGGNBCCT
 C G T A A G C T A C G T C G T A A G T C C G T A C T G A C T A G A C T G C G A T C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

PH0158.1_Rhox11_2/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----ATTACAAGGTACA
TCNCTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T C G T A A G C T A C G T C G T A A G T C C G T A C T G A C T A G A C T G C G A T C G T A A G T C C G T A
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T