Information for 4-TTTGTTTGTGTTGGCA (Motif 5)

A G C T G A C T A C G T T C A G A C G T A G C T A C G T A C T G C G A T A T C G A G C T A C G T C T A G A C T G A T G C G T C A
Reverse Opposite:
C A G T T A C G G T A C A G T C C G T A C T G A T A G C C G T A T G A C T C G A C T G A C G T A A G T C G T C A C T G A T C G A
p-value:1e-16
log p-value:-3.876e+01
Information Content per bp:1.690
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.66%
Number of Background Sequences with motif14.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets45.9 +/- 27.2bp
Average Position of motif in Background40.0 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.80
Offset:0
Orientation:forward strand
Alignment:TTTGTTTGTGTTGGCA
NNTGTTTATTTTGGCA
 A G C T G A C T A C G T T C A G A C G T A G C T A C G T A C T G C G A T A T C G A G C T A C G T C T A G A C T G A T G C G T C A
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTTGTTTGTGTTGGCA
CCTTTGTTTT--------
 A C G T A C G T A G C T G A C T A C G T T C A G A C G T A G C T A C G T A C T G C G A T A T C G A G C T A C G T C T A G A C T G A T G C G T C A
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TTTGTTTGTGTTGGCA
ANTCCTTTGTCTNNNN-----
 A C G T A C G T A C G T A C G T A C G T A G C T G A C T A C G T T C A G A C G T A G C T A C G T A C T G C G A T A T C G A G C T A C G T C T A G A C T G A T G C G T C A
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTTGTTTGTGTTGGCA
CTTTGTTTACTTTTN--
 A C G T A G C T G A C T A C G T T C A G A C G T A G C T A C G T A C T G C G A T A T C G A G C T A C G T C T A G A C T G A T G C G T C A
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------TTTGTTTGTGTTGGCA
TNNTCCTTTGTTCTNNT-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T A C G T T C A G A C G T A G C T A C G T A C T G C G A T A T C G A G C T A C G T C T A G A C T G A T G C G T C A
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T A C G T A C G T A C G T A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTTGTTTGTGTTGGCA
NNNNTTTGTTTACNNT----
 A C G T A C G T A C G T A C G T A G C T G A C T A C G T T C A G A C G T A G C T A C G T A C T G C G A T A T C G A G C T A C G T C T A G A C T G A T G C G T C A
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.59
Offset:8
Orientation:reverse strand
Alignment:TTTGTTTGTGTTGGCA--
--------NNTTGGCANN
 A G C T G A C T A C G T T C A G A C G T A G C T A C G T A C T G C G A T A T C G A G C T A C G T C T A G A C T G A T G C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

Foxd3/MA0041.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTTGTTTGTGTTGGCA
GAATGTTTGTTT-----
 A C G T A G C T G A C T A C G T T C A G A C G T A G C T A C G T A C T G C G A T A T C G A G C T A C G T C T A G A C T G A T G C G T C A
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:TTTGTTTGTGTTGGCA-
--------GGTTGGCAT
 A G C T G A C T A C G T T C A G A C G T A G C T A C G T A C T G C G A T A T C G A G C T A C G T C T A G A C T G A T G C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

PB0061.1_Sox11_1/Jaspar

Match Rank:10
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------TTTGTTTGTGTTGGCA
NNNTCCTTTGTTCTNNN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T A C G T T C A G A C G T A G C T A C G T A C T G C G A T A T C G A G C T A C G T C T A G A C T G A T G C G T C A
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T A C G T A C G T A C G T A C G T A C G T