Information for 7-GTTCTGCCAG (Motif 6)

A T C G A C G T A C G T A G T C C G A T A C T G A G T C A G T C C G T A C T A G
Reverse Opposite:
A G T C C G A T A C T G C T A G G T A C C G T A T A C G C G T A C G T A A T G C
p-value:1e-17
log p-value:-4.083e+01
Information Content per bp:1.840
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.92%
Number of Background Sequences with motif11.3
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets46.6 +/- 29.0bp
Average Position of motif in Background64.6 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GTTCTGCCAG-
---TTGCCAAG
 A T C G A C G T A C G T A G T C C G A T A C T G A G T C A G T C C G T A C T A G A C G T
A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GTTCTGCCAG--
---CTGCCCGCA
 A T C G A C G T A C G T A G T C C G A T A C T G A G T C A G T C C G T A C T A G A C G T A C G T
A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GTTCTGCCAG
----TGCCAA
 A T C G A C G T A C G T A G T C C G A T A C T G A G T C A G T C C G T A C T A G
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GTTCTGCCAG-
--CGTGCCAAG
 A T C G A C G T A C G T A G T C C G A T A C T G A G T C A G T C C G T A C T A G A C G T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

PB0195.1_Zbtb3_2/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTTCTGCCAG------
NNNNTGCCAGTGATTG
 A T C G A C G T A C G T A G T C C G A T A C T G A G T C A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GTTCTGCCAG---
---ATGCCAGACN
 A T C G A C G T A C G T A G T C C G A T A C T G A G T C A G T C C G T A C T A G A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GTTCTGCCAG--
---ATGCCAACC
 A T C G A C G T A C G T A G T C C G A T A C T G A G T C A G T C C G T A C T A G A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GTTCTGCCAG--
----TGTCANYT
 A T C G A C G T A C G T A G T C C G A T A C T G A G T C A G T C C G T A C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GTTCTGCCAG--
--GGTGCCAAGT
 A T C G A C G T A C G T A G T C C G A T A C T G A G T C A G T C C G T A C T A G A C G T A C G T
A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GTTCTGCCAG-
---YTGWCADY
 A T C G A C G T A C G T A G T C C G A T A C T G A G T C A G T C C G T A C T A G A C G T
A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C