Information for 5-TGTACYCTGA (Motif 4)

C G A T C T A G G C A T C G T A G T A C A G C T A G T C C G A T T A C G C T G A
Reverse Opposite:
G A C T A T G C C G T A C T A G C T G A C A T G G C A T C G T A G A T C C G T A
p-value:1e-22
log p-value:-5.219e+01
Information Content per bp:1.695
Number of Target Sequences with motif123.0
Percentage of Target Sequences with motif17.98%
Number of Background Sequences with motif436.0
Percentage of Background Sequences with motif6.68%
Average Position of motif in Targets51.0 +/- 28.1bp
Average Position of motif in Background51.6 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TGTACYCTGA------
TGGACTTTGNNCTNTG
 C G A T C T A G G C A T C G T A G T A C A G C T A G T C C G A T T A C G C T G A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGTACYCTGA-----
TGGACTTTGNNCTCN
 C G A T C T A G G C A T C G T A G T A C A G C T A G T C C G A T T A C G C T G A A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGTACYCTGA
CTGTTCCTGG-
 A C G T C G A T C T A G G C A T C G T A G T A C A G C T A G T C C G A T T A C G C T G A
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGTACYCTGA----
TGACCTTTGACCTC
 C G A T C T A G G C A T C G T A G T A C A G C T A G T C C G A T T A C G C T G A A C G T A C G T A C G T A C G T
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGTACYCTGA
CTGACCTTTG-
 A C G T C G A T C T A G G C A T C G T A G T A C A G C T A G T C C G A T T A C G C T G A
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TGTACYCTGA----
ATTGGACTTTGACCCC
 A C G T A C G T C G A T C T A G G C A T C G T A G T A C A G C T A G T C C G A T T A C G C T G A A C G T A C G T A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

NR2C2/MA0504.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGTACYCTGA-----
TGACCTCTGACCCCN
 C G A T C T A G G C A T C G T A G T A C A G C T A G T C C G A T T A C G C T G A A C G T A C G T A C G T A C G T A C G T
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

RXRG/MA0856.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGTACYCTGA----
TGACCTTTGACCCC
 C G A T C T A G G C A T C G T A G T A C A G C T A G T C C G A T T A C G C T G A A C G T A C G T A C G T A C G T
A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C

Nr2f6/MA0677.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGTACYCTGA----
TGACCTTTGACCTN
 C G A T C T A G G C A T C G T A G T A C A G C T A G T C C G A T T A C G C T G A A C G T A C G T A C G T A C G T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

Rxra/MA0512.2/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGTACYCTGA----
TGACCTTTGACCCC
 C G A T C T A G G C A T C G T A G T A C A G C T A G T C C G A T T A C G C T G A A C G T A C G T A C G T A C G T
A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C